PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3itcA_

Fold library id	PDB Header	Molecule	Title
c3itcA_	PDB header: hydrolase	Chain: A: PDB Molecule: renal dipeptidase;	PDBTitle: crystal structure of sco3058 with bound citrate and glycerol

Links to external resources
Added to library: Sat Aug 28 16:09:07 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M T S L E K A R E L L R E F P V V D G H N D L P W A L R E Q V R Y D L D A R D I A A D Q S A H L H T D L A R L R S G G V G A Q Y W S V Y V R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
G G G G
T T S
T T T
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S D L P G A V T A T L E Q I D C V R R L I D R H P G E L R A A L T A A D M E A A R A E G R I A S L M G A E G G H S I D N S L A T L R A L Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
T T T
S T
G G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L G V R Y M T L T H N D N N A W A D S A T D E P G V G G L S A F G R E V V R E M N R E G M L V D L S H V A A T T M R D A L D T S T A P V I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S S
B T T B
B T T S
S S S S B
T
T T B
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S H S S S R A V C D H P R N I P D D V L E R L S A N G G M A M V T F V P K F V L Q A A V D W T A E A D D N M R A H G F H H L D S S P E A M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B T T T S
T T S B
T
T T
T T
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence V H A A F E E R V P R P V A T V S T V A D H L D H M R E V A G V D H L G I G G D Y D G T P F T P D G L G D V S G Y P N L I A E L L D R G W S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B
G G G
B T S
S
B T
S S G G G T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . .

Sequence Q S D L A K L T W K N A V R V L D A A E D V S R G L R A A R G P S N A T I E Q L D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	S	L	E	K	A	R	E	L	L	R	E	F	P	V	V	D	G	H	N	D	L	P	W	A	L	R	E	Q	V	R	Y	D	L	D	A	R	D	I	A	A	D	Q	S	A	H	L	H	T	D	L	A	R	L	R	S	G	G	V	G	A	Q	Y	W	S	V	Y	V	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S																		T	T		G	G	G	G		T	T	S			T	T	T		S										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	D	L	P	G	A	V	T	A	T	L	E	Q	I	D	C	V	R	R	L	I	D	R	H	P	G	E	L	R	A	A	L	T	A	A	D	M	E	A	A	R	A	E	G	R	I	A	S	L	M	G	A	E	G	G	H	S	I	D	N	S	L	A	T	L	R	A	L	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S																					T	T	T						S											T											G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	G	V	R	Y	M	T	L	T	H	N	D	N	N	A	W	A	D	S	A	T	D	E	P	G	V	G	G	L	S	A	F	G	R	E	V	V	R	E	M	N	R	E	G	M	L	V	D	L	S	H	V	A	A	T	T	M	R	D	A	L	D	T	S	T	A	P	V	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S		S	S	S		B	T	T	B		B	T	T	S			S	S	S	S	B															T						T	T	B													S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	H	S	S	S	R	A	V	C	D	H	P	R	N	I	P	D	D	V	L	E	R	L	S	A	N	G	G	M	A	M	V	T	F	V	P	K	F	V	L	Q	A	A	V	D	W	T	A	E	A	D	D	N	M	R	A	H	G	F	H	H	L	D	S	S	P	E	A	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			B	T	T	T	S			T	T	S	B												T																														T	T			T	T			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	H	A	A	F	E	E	R	V	P	R	P	V	A	T	V	S	T	V	A	D	H	L	D	H	M	R	E	V	A	G	V	D	H	L	G	I	G	G	D	Y	D	G	T	P	F	T	P	D	G	L	G	D	V	S	G	Y	P	N	L	I	A	E	L	L	D	R	G	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S						B																	G	G	G							B	T	S		S				B	T		S	S	G	G	G											T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Sequence	Q	S	D	L	A	K	L	T	W	K	N	A	V	R	V	L	D	A	A	E	D	V	S	R	G	L	R	A	A	R	G	P	S	N	A	T	I	E	Q	L	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T