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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c4a1aM_

Fold library idPDB HeaderMoleculeTitle
c4a1aM_PDB header: ribosomeChain: M: PDB Molecule: 60s ribosomal protein l5;PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3.


Added to library: Sat Dec 3 17:36:23 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFVKVLKTKAYFKRFQTKYRRRREGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKC
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Known secondary structure (DSSP)





S





TT





TTS
S



SS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKP
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Known secondary structure (DSSP) TTTT

S
TTST
TTT



SS


S


GGGT

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence FKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDA
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Known secondary structure (DSSP)
B

TTS


SS
TT
B



SSSSSS

SS



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence YMKHLKGQSNEAFQKQFSKWSKTLEAAKVDSVEKLFTKVHAEIRKNPERVKSTKKNDKPKRDHKKFYPTK
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Known secondary structure (DSSP)
TT
S
S













S


 .........290.........300
Sequence LTAAQRKDRVKTKFQLALSQ
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Known secondary structure (DSSP)

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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