Fold library entry viewer: c3f93D_

Added to library: Sat Aug 28 19:48:50 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	V	N	W	P	Y	V	N	T	K	L	K	R	D	P	A	V	E	A	Q	I	E	K	L	L	A	K	M	T	I	E	Q	K	V	A	Q	M	I	Q	P	E	I	G	Y	L	T	V	E	Q	M	R	K	Y	G	F	G	S	Y	L	N	G	G	N	T	A	P	Y	G	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																	S														B	T	T	T												S						T	T			G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	A	D	Q	A	T	W	L	K	Y	A	D	E	M	Y	L	A	A	M	D	S	T	L	D	G	I	A	I	P	T	V	W	G	T	D	A	M	H	G	H	S	N	V	Y	G	A	T	L	F	P	H	N	I	G	L	G	A	A	R	D	T	D	L	I	K	R	I	G	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																					T	T	T	S												T	T	S	S	T	T	S	T	T													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	A	K	E	V	A	A	T	G	I	E	W	S	F	A	P	T	V	A	V	V	R	D	D	R	W	G	R	T	Y	E	S	Y	S	E	D	P	D	L	V	K	R	Y	A	G	E	M	V	T	G	I	Q	G	D	V	G	A	D	F	L	K	G	S	N	R	I	A	T	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T								B							T	T	S	T	T	G	G	G	S	S		S																				T	T	T	T	T	T		T	T			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	F	V	G	D	G	G	T	E	R	G	V	D	R	G	N	T	L	I	D	E	K	G	L	R	D	I	H	S	A	G	Y	F	S	A	I	N	Q	G	V	Q	S	V	M	A	S	F	N	S	W	N	G	K	R	V	H	G	D	K	H	L	L	T	D	V	L	K	N	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G		G	G	G		T	T													T	T	T									T	T		S						S	S			T	T			G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	F	D	G	F	V	V	S	D	W	N	A	H	K	F	V	E	G	C	D	L	E	Q	C	A	Q	A	I	N	A	G	V	D	V	I	M	V	P	E	H	F	E	A	F	Y	H	N	T	V	K	Q	V	K	A	G	V	I	A	E	S	R	I	N	D	A	V	R	R	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						T	T	G	G	G	G	S	T	T		B	T	T	B								T			B				T	T	T															T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	A	K	I	R	W	G	V	F	T	K	S	K	P	S	A	R	P	E	S	Q	H	P	Q	W	L	G	A	A	E	H	R	T	L	A	R	E	A	V	R	K	S	L	V	L	L	K	N	N	E	S	I	L	P	I	K	A	S	S	R	I	L	V	A	G	K	G	A	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	S		S	G	G	G	S	G	G	G	S		G	G	G	T	T																						G	G	G			S	B		T	T	S						S	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	N	M	Q	A	G	G	W	S	V	S	W	Q	G	T	D	N	T	N	S	D	F	P	N	A	T	S	I	F	S	G	L	Q	S	Q	V	T	K	A	G	G	K	I	T	L	S	E	S	G	E	Y	T	S	K	P	D	V	A	I	V	V	I	G	E	E	P	Y	A	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	S	S	S	S		T	T			G	G	G		T	T		B													T	T							T	T				S	S			S													G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	G	D	I	E	L	L	E	F	Q	H	E	T	K	H	A	L	A	L	L	K	Q	L	K	A	D	N	I	P	V	V	T	V	F	L	S	G	R	P	L	W	V	N	K	E	L	N	A	S	D	A	F	V	A	A	W	L	P	G	S	E	G	E	G	V	A	D	V	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G			S			B	T	T	T	T	T													T	T										S	S			B							T		S									T	T	B	T								B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	N	K	Q	G	K	T	Q	F	D	F	T	G	K	L	S	F	S	W	P	K	Y	D	D	Q	F	T	L	N	L	N	D	A	D	Y	D	P	L	F	A	Y	G	Y	G	L	T	Y	Q	D	N	I	N	V	P	V	L	S	E	K	T	S	P	S	H	P	L	F	V	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S											S	S		B		S	S	T	T			S			T	T		S	S				S	B		T	T			B		T	T																				S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	A	K	N	M	T	W	Q	L	A	D	T	S	T	Q	K	V	L	A	S	G	A	S	A	T	S	G	D	K	Q	S	L	L	M	Q	S	V	N	L	S	Y	Q	E	D	G	R	G	F	N	W	R	A	Q	A	A	L	S	L	S	Y	L	E	P	T	P	L	D	S	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T								S	S	S							S	S					T	T	S	S	S								S	S	S	T	T								S	S	S															G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	T	G	Y	L	E	L	K	M	R	I	D	K	A	P	E	Q	G	A	N	L	Q	V	M	C	S	E	S	N	C	L	R	D	I	D	F	S	S	F	S	Q	L	M	A	D	K	S	W	H	T	L	A	I	P	L	H	C	D	Q	P	I	T	D	A	L	R	I	T	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T														S	S										S	S								G	G	G	G	G	G	G	T	T	T	S	S								S															S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Sequence	N	L	S	L	A	I	A	D	V	A	L	T	I	K	P	S	D	D	S	I	S	L	T	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	S			S	S

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PDB structure

FASTA sequence

Hidden Markov model

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