Fold library entry viewer: c1ex1A_

Added to library: Tue Mar 16 12:47:18 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	Y	V	L	Y	K	D	A	T	K	P	V	E	D	R	V	A	D	L	L	G	R	M	T	L	A	E	K	I	G	Q	M	T	Q	I	E	R	L	V	A	T	P	D	V	L	R	D	N	F	I	G	S	L	L	S	G	G	G	S	V	P	R	K	G	A	T	A	K	E	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G		T	T	S											T	T										T					G	G	G									T	T								T	T			S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	D	M	V	D	G	F	Q	K	A	C	M	S	T	R	L	G	I	P	M	I	Y	G	I	D	A	V	H	G	Q	N	N	V	Y	G	A	T	I	F	P	H	N	V	G	L	G	A	T	R	D	P	Y	L	V	K	R	I	G	E	A	T	A	L	E	V	R	A	T	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S	S	S											S	S	S	S	T	T	S	T	T														T																		T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	Y	A	F	A	P	C	I	A	V	C	R	D	P	R	W	G	R	C	Y	E	S	Y	S	E	D	R	R	I	V	Q	S	M	T	E	L	I	P	G	L	Q	G	D	V	P	K	D	F	T	S	G	M	P	F	V	A	G	K	N	K	V	A	A	C	A	K	H	F	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B							T	T	S	T	T	G	G	G	S	S		S	S								T	T											T	T			T	T						S	T	T	S		B							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	G	G	T	V	D	G	I	N	E	N	N	T	I	I	N	R	E	G	L	M	N	I	H	M	P	A	Y	K	N	A	M	D	K	G	V	S	T	V	M	I	S	Y	S	S	W	N	G	V	K	M	H	A	N	Q	D	L	V	T	G	Y	L	K	D	T	L	K	F	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		G	G	G		T	T														T	S									T	T								S	S			T	T			G	G	G											T	T	S				S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	V	I	S	D	W	E	G	I	D	R	I	T	T	P	A	G	S	D	Y	S	Y	S	V	K	A	S	I	L	A	G	L	D	M	I	M	V	P	N	K	Y	Q	Q	F	I	S	I	L	T	G	H	V	N	G	G	V	I	P	M	S	R	I	D	D	A	V	T	R	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	G	G	G	S	S	S	T	T	S													T			B					S															T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	V	K	F	T	M	G	L	F	E	N	P	Y	A	D	P	A	M	A	E	Q	L	G	K	Q	E	H	R	D	L	A	R	E	A	A	R	K	S	L	V	L	L	K	N	G	K	T	S	T	D	A	P	L	L	P	L	P	K	K	A	P	K	I	L	V	A	G	S	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T			S			G	G	G	G	G	G	T	T																						S	S	S	T	T	S					S			S			S						S	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	N	L	G	Y	Q	C	G	G	W	T	I	E	W	Q	G	D	T	G	R	T	T	V	G	T	T	I	L	E	A	V	K	A	A	V	D	P	S	T	V	V	V	F	A	E	N	P	D	A	E	F	V	K	S	G	G	F	S	Y	A	I	V	A	V	G	E	H	P	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								S	S	S	S	S	T	T			S	S			S	S		B										S		T	T	S						S	S									T	T		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	T	K	G	D	N	L	N	L	T	I	P	E	P	G	L	S	T	V	Q	A	V	C	G	G	V	R	C	A	T	V	L	I	S	G	R	P	V	V	V	Q	P	L	L	A	A	S	D	A	L	V	A	A	W	L	P	G	S	E	G	Q	G	V	T	D	A	L	F	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G			S	S					S	S	S											S									S	S												S										S	B	T								T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Sequence	F	G	F	T	G	R	L	P	R	T	W	F	K	S	V	D	Q	L	P	M	N	V	G	D	A	H	Y	D	P	L	F	R	L	G	Y	G	L	T	T	N	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	S		B		S		G	G	G		S			T	T		T	T				S	B		T	T			B

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PDB structure

FASTA sequence

Hidden Markov model

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