PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3gmiA_

Fold library id	PDB Header	Molecule	Title
c3gmiA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: upf0348 protein mj0951;	PDBTitle: crystal structure of a protein of unknown function from2 methanocaldococcus jannaschii

Links to external resources
Added to library: Sat Aug 28 18:39:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q A M L I G E I M D L N L K N F L E D R E E I I R D A K R K D E K S F K D F K K I V E E I K E R E N K D K I V C D F T E Y N P L H K G H K Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A L E K G K E H G I F I S V L P G P L E R S G R G I P Y F L N R Y I R A E M A I R A G A D I V V E G P P M G I M G S G Q Y M R C L I K M F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T S B
T T S S B
S S
T
S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S L G A E I I P R G Y I P E K T M E K V I D C I N K G Y H I Q V K P Y K I I C I E T G E I L G E K L N I D N Y V I A S M S Q M I Y K L N R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T T T T T
S
G G G T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence G L K F N P K F V F V K R L E G I S G T K I R E A I F S G K F E D I K N M L P K T T L S I L K E L Y D N G K L N E L I L K R F E D R I L E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T
G G G T G G G S
T T
S G G G S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A N E Y D L Y E Y L P S N V A E I L E K K R P F N N I E E I K N S L P Y G F S R H F R E R I L S K L E A R I P N E T L S K Y I N N Y P A K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G T S
S S S
T T
S

. . . . . .

Sequence K I L A V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	A	M	L	I	G	E	I	M	D	L	N	L	K	N	F	L	E	D	R	E	E	I	I	R	D	A	K	R	K	D	E	K	S	F	K	D	F	K	K	I	V	E	E	I	K	E	R	E	N	K	D	K	I	V	C	D	F	T	E	Y	N	P	L	H	K	G	H	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																		T												T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	E	K	G	K	E	H	G	I	F	I	S	V	L	P	G	P	L	E	R	S	G	R	G	I	P	Y	F	L	N	R	Y	I	R	A	E	M	A	I	R	A	G	A	D	I	V	V	E	G	P	P	M	G	I	M	G	S	G	Q	Y	M	R	C	L	I	K	M	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S	S									T	T	S	B		T	T	S	S	B		S	S													T		S								G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	G	A	E	I	I	P	R	G	Y	I	P	E	K	T	M	E	K	V	I	D	C	I	N	K	G	Y	H	I	Q	V	K	P	Y	K	I	I	C	I	E	T	G	E	I	L	G	E	K	L	N	I	D	N	Y	V	I	A	S	M	S	Q	M	I	Y	K	L	N	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T																							T	T							T	T					T	T	T						S				G	G	G																T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	L	K	F	N	P	K	F	V	F	V	K	R	L	E	G	I	S	G	T	K	I	R	E	A	I	F	S	G	K	F	E	D	I	K	N	M	L	P	K	T	T	L	S	I	L	K	E	L	Y	D	N	G	K	L	N	E	L	I	L	K	R	F	E	D	R	I	L	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													S														T	T		G	G	G	T	G	G	G	S														T	T		S	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	N	E	Y	D	L	Y	E	Y	L	P	S	N	V	A	E	I	L	E	K	K	R	P	F	N	N	I	E	E	I	K	N	S	L	P	Y	G	F	S	R	H	F	R	E	R	I	L	S	K	L	E	A	R	I	P	N	E	T	L	S	K	Y	I	N	N	Y	P	A	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		G	G	G	T	S															S	S								S		T	T																															S
	.	.	.	.	.	.
Sequence	K	I	L	A	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)