PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2qgqF_

Fold library id	PDB Header	Molecule	Title
c2qgqF_	PDB header: structural genomics, unknown function	Chain: F: PDB Molecule: protein tm_1862;	PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77

Links to external resources
Added to library: Tue Mar 16 13:22:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E R P Y A Y V K I S D G S L R S R S I E D I T R E V E D L L K E G K K E I I L V A Q D T T S Y G I D L Y R K Q A L P D L L R R L N S L N G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
B
T T
S
G G G T T T T T T S S
T S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F W I R V X Y L H P D H L T E E I I S A X L E L D K V V K Y F D V P V Q H G S D K I L K L X G R T K S S E E L K K X L S S I R E R F P D A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T B
S
B
S
T
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L R T S I I V G F P G E T E E D F E E L K Q F V E E I Q F D K L G A F V Y S D K V D P E X A K R R Q E E L L L L Q A E I S N S R L D R F V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S
T T B T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . .

Sequence K K L K F L V E G K E G K F L V G R T W T E A P E V D G V V F V R G K G K I G D F L E V V I K E H D E Y D X W G S V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T T S
S
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	R	P	Y	A	Y	V	K	I	S	D	G	S	L	R	S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	E	G	K	K	E	I	I	L	V	A	Q	D	T	T	S	Y	G	I	D	L	Y	R	K	Q	A	L	P	D	L	L	R	R	L	N	S	L	N	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							B						B																T	T									S		G	G	G	T	T	T	T	T	T	S	S												T	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	W	I	R	V	X	Y	L	H	P	D	H	L	T	E	E	I	I	S	A	X	L	E	L	D	K	V	V	K	Y	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	E	E	L	K	K	X	L	S	S	I	R	E	R	F	P	D	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G													T	T	B		S							B		S									T			S																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	R	T	S	I	I	V	G	F	P	G	E	T	E	E	D	F	E	E	L	K	Q	F	V	E	E	I	Q	F	D	K	L	G	A	F	V	Y	S	D	K	V	D	P	E	X	A	K	R	R	Q	E	E	L	L	L	L	Q	A	E	I	S	N	S	R	L	D	R	F	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		T	T																			S																																					T	T	B	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Sequence	K	K	L	K	F	L	V	E	G	K	E	G	K	F	L	V	G	R	T	W	T	E	A	P	E	V	D	G	V	V	F	V	R	G	K	G	K	I	G	D	F	L	E	V	V	I	K	E	H	D	E	Y	D	X	W	G	S	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T							T	T			T	T	T	S							S				T	T												T	T