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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3izcQ_

Fold library idPDB HeaderMoleculeTitle
c3izcQ_PDB header: ribosomeChain: Q: PDB Molecule: 60s ribosomal protein rpl5 (l18p);PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome


Added to library: Sat Dec 11 13:44:40 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTIT
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TTSSGGGTTSS
T


TTTS



S
SSS
SSSS


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGVEEVEGEYELTEAVEDGPR
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Known secondary structure (DSSP) SSSSS

S
SSSTT
SS



TTTS


S


SS


SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence PFKVFLDIGLQRTTTGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEE
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BS

TT



SS
TTT
B



TTTS

SS



SSS



SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LADDDEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQTKLSKE
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SS
STTS












SSS

TTTTTTSSSSS
SS

 .........290.......
Sequence ERAARVAAKIAALAGQQ
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Known secondary structure (DSSP) S
S

SSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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