Fold library entry viewer: d2vcha1

Added to library: Tue Mar 16 14:27:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	H	V	A	I	I	P	S	P	G	M	G	H	L	I	P	L	V	E	F	A	K	R	L	V	H	L	H	G	L	T	V	T	F	V	I	A	G	E	G	P	P	S	A	Q	R	T	V	L	D	L	P	S	S	I	S	S	V	F	L	P	P	V	D	L	T	D	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																														S	S	S												T	T												T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	S	T	R	I	E	S	R	I	S	L	T	V	T	R	S	N	P	E	L	R	K	V	F	D	S	F	V	E	G	G	R	L	P	T	A	L	V	V	D	L	F	G	T	D	A	F	D	V	A	V	E	F	H	V	P	P	Y	I	F	Y	P	T	T	A	N	V	L	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T													T	T														T	T				S						T	T		G	G	G							T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	L	H	L	P	K	L	D	E	T	V	S	C	E	F	R	E	L	T	E	P	L	M	L	P	G	C	V	P	V	A	G	K	D	F	L	D	P	A	Q	D	R	K	D	D	A	Y	K	W	L	L	H	N	T	K	R	Y	K	E	A	E	G	I	L	V	N	T	F	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		G	G	G		S	S		B			T	T				B		G	G	G	S		G	G	G	S		T	T	S													G	G	G		S					S			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	E	P	N	A	I	K	A	L	Q	E	P	G	L	D	K	P	P	V	Y	P	V	G	P	L	V	N	I	G	K	Q	E	A	S	E	C	L	K	W	L	D	N	Q	P	L	G	S	V	L	Y	V	S	F	G	S	G	G	T	L	T	C	E	Q	L	N	E	L	A	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S									S			T	T														S		S											T	S		T	T								T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	A	D	S	E	Q	R	F	L	W	V	I	R	S	P	S	G	I	A	N	S	S	Y	F	D	S	Q	T	D	P	L	T	F	L	P	P	G	F	L	E	R	T	K	K	R	G	F	V	I	P	F	W	A	P	Q	A	Q	V	L	A	H	P	S	T	G	G	F	L	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T												S	S	T	T	T	T	T	T				S		G	G	G	G	S		T	T					T	T	T	T						S										S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	C	G	W	N	S	T	L	E	S	V	V	S	G	I	P	L	I	A	W	P	L	Y	A	E	Q	K	M	N	A	V	L	L	S	E	D	I	R	A	A	L	R	P	R	A	G	D	D	G	L	V	R	R	E	E	V	A	R	V	V	K	G	L	M	E	G	E	E	G	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T									S	T	T											T	T										T	T	S																T	S	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Sequence	V	R	N	K	M	K	E	L	K	E	A	A	C	R	V	L	K	D	D	G	T	S	T	K	A	L	S	L	V	A	L	K	W	K	A	H	K	K	E	L	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S	T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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