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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1x38a1

Fold library idFoldSuperfamilyFamily
d1x38a1TIM beta/alpha-barrel(Trans)glycosidasesNagZ-like


Added to library: Tue Mar 16 12:20:06 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DYVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEW
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Known secondary structure (DSSP)


GGG
TTS
TT

TGGG

TT


TT

SSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence QDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRATGI
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Known secondary structure (DSSP) TSSS





SSSSTTSTT





T
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVG
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Known secondary structure (DSSP)



B



S
TTSTTGGGSS
SSGGG



TT

TT




STTS
B
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DGGTVDGINENNTIINREGLMNIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKG
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Known secondary structure (DSSP) GGG
GGG
TT



TSTT


SSTTGGG





TTS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence FVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRIL
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Known secondary structure (DSSP)

TTTTGGGSSSTTTTT

B

S
TTSS
 .........360.........370.........380........
Sequence RVKFTMGLFENPYADPAMAEQLGKQEHRDLAREAARKS
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Known secondary structure (DSSP) TTTTT

S

GGGGGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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