PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1nmpa_

Fold library id	Fold	Superfamily	Family
d1nmpa_	NIF3 (NGG1p interacting factor 3)-like	NIF3 (NGG1p interacting factor 3)-like	NIF3 (NGG1p interacting factor 3)-like

Links to external resources
Added to library: Tue Mar 16 12:25:27 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K N T E L E Q L I N E K L N S A A I S D Y A P N G L Q V E G K E T V Q K I V T G V T A S Q A L L D E A V R L G A D A V I V H H G Y F W K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T
T T
S S
S B
T T
S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E S P V I R G M K R N R L K T L L A N D I N L Y G W H L P L D A H P E L G N N A Q L A A L L G I T V M G E I E P L V P W G E L T M P V P G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T S T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E L A S W I E A R L G R K P L W C G D T G P E V V Q R V A W C T G G G Q S F I D S A A R F G V D A F I T G E V S E Q T I H S A R E Q G L H F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
S S
S S S
G G G
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence Y A A G H H A T E R G G I R A L S E W L N E N T D L D V T F I D I P N P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	N	T	E	L	E	Q	L	I	N	E	K	L	N	S	A	A	I	S	D	Y	A	P	N	G	L	Q	V	E	G	K	E	T	V	Q	K	I	V	T	G	V	T	A	S	Q	A	L	L	D	E	A	V	R	L	G	A	D	A	V	I	V	H	H	G	Y	F	W	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B												T	T		T	T				S	S										S	B																					T	T		S								S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	S	P	V	I	R	G	M	K	R	N	R	L	K	T	L	L	A	N	D	I	N	L	Y	G	W	H	L	P	L	D	A	H	P	E	L	G	N	N	A	Q	L	A	A	L	L	G	I	T	V	M	G	E	I	E	P	L	V	P	W	G	E	L	T	M	P	V	P	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T														T	T	T	S									T	T									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	L	A	S	W	I	E	A	R	L	G	R	K	P	L	W	C	G	D	T	G	P	E	V	V	Q	R	V	A	W	C	T	G	G	G	Q	S	F	I	D	S	A	A	R	F	G	V	D	A	F	I	T	G	E	V	S	E	Q	T	I	H	S	A	R	E	Q	G	L	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	S							T	T			S	S								S	S	S		G	G	G										S					S													T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	Y	A	A	G	H	H	A	T	E	R	G	G	I	R	A	L	S	E	W	L	N	E	N	T	D	L	D	V	T	F	I	D	I	P	N	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T															S	S