PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1yira1

Fold library id	Fold	Superfamily	Family
d1yira1	TIM beta/alpha-barrel	Nicotinate/Quinolinate PRTase C-terminal domain-like	Monomeric nicotinate phosphoribosyltransferase C-terminal domain

Links to external resources
Added to library: Tue Mar 16 12:08:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T V E Q A R E R L Q E K F D W L R R E A S A E E L A G F K M A D F G T R R R F S Y R V H E A V V S G L K E D F P G C F V G T S N V H L A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
S T T
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L D L K P L G T M A H E W L M A H Q Q L G P R L I D S Q S A A L D C W V R E Y R G L L G I A L T D C I T T D A F L R D F D L Y F A K L F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B
S S
G G G T T S S
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G L R H D S G D P L L W A E K T I A H Y L K L G I D P L T K T L V F S D G L D L P R A L K I Y R A L Q G R I N V S F G I G T H F T C D L P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
G G G S
S S
T T T S
S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .

Sequence V E P M N I V V K M S A C N G H P V A K I S D T P P D F I H Y L K H V F Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	V	E	Q	A	R	E	R	L	Q	E	K	F	D	W	L	R	R	E	A	S	A	E	E	L	A	G	F	K	M	A	D	F	G	T	R	R	R	F	S	Y	R	V	H	E	A	V	V	S	G	L	K	E	D	F	P	G	C	F	V	G	T	S	N	V	H	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S						T	T								S	T	T		S																	S	S						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	D	L	K	P	L	G	T	M	A	H	E	W	L	M	A	H	Q	Q	L	G	P	R	L	I	D	S	Q	S	A	A	L	D	C	W	V	R	E	Y	R	G	L	L	G	I	A	L	T	D	C	I	T	T	D	A	F	L	R	D	F	D	L	Y	F	A	K	L	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			B																S	S		G	G	G														T	T	S	S					S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	L	R	H	D	S	G	D	P	L	L	W	A	E	K	T	I	A	H	Y	L	K	L	G	I	D	P	L	T	K	T	L	V	F	S	D	G	L	D	L	P	R	A	L	K	I	Y	R	A	L	Q	G	R	I	N	V	S	F	G	I	G	T	H	F	T	C	D	L	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S																	T			G	G	G	S						S	S														T	T	T	S												S			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Sequence	V	E	P	M	N	I	V	V	K	M	S	A	C	N	G	H	P	V	A	K	I	S	D	T	P	P	D	F	I	H	Y	L	K	H	V	F	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T								S														T