PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2yybA_

Fold library id	PDB Header	Molecule	Title
c2yybA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: hypothetical protein ttha1606;	PDBTitle: crystal structure of ttha1606 from thermus thermophilus hb8

Links to external resources
Added to library: Tue Mar 16 14:12:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D R D E L V R Y L D A Y L R I Q D F P Q D P S L N G L Q V E G K R T V R K V G A A V D A G E A I F R K A L E E E V D F L I V H H G L F W G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T G G G
T T
S S
S B
S T T
S
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K P F P I V G H H K R R L E T L F Q G G I N L Y A A H L P L D A H E E V G N N F V L A R E L G L V D L T P W D V G V K G R F P Q P T P L L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S
T T T
T T T
S
S T T
S
B S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V A D R L G Q L T G M Q P L V H Q G G L D H V E T V I L V S G S G T G L L P K V D A D L F V T G E P K H S V F H E T F E R G L N V I Y A G H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S S
S B
S S
G G G G G G
S S S
G G G T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence Y D T E T F G V K A L A A H L E A R F G L P W V F L D H P T G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	R	D	E	L	V	R	Y	L	D	A	Y	L	R	I	Q	D	F	P	Q	D	P	S	L	N	G	L	Q	V	E	G	K	R	T	V	R	K	V	G	A	A	V	D	A	G	E	A	I	F	R	K	A	L	E	E	E	V	D	F	L	I	V	H	H	G	L	F	W	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B												T	T	G	G	G		T	T		S	S										S	B											S										T	T		S								S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	P	F	P	I	V	G	H	H	K	R	R	L	E	T	L	F	Q	G	G	I	N	L	Y	A	A	H	L	P	L	D	A	H	E	E	V	G	N	N	F	V	L	A	R	E	L	G	L	V	D	L	T	P	W	D	V	G	V	K	G	R	F	P	Q	P	T	P	L	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S														T	T							S							T	T	T									T	T	T			S					S	T	T									S		B	S	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	A	D	R	L	G	Q	L	T	G	M	Q	P	L	V	H	Q	G	G	L	D	H	V	E	T	V	I	L	V	S	G	S	G	T	G	L	L	P	K	V	D	A	D	L	F	V	T	G	E	P	K	H	S	V	F	H	E	T	F	E	R	G	L	N	V	I	Y	A	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	S							S	S		S	B									S	S		G	G	G	G	G	G			S	S					S				G	G	G							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	Y	D	T	E	T	F	G	V	K	A	L	A	A	H	L	E	A	R	F	G	L	P	W	V	F	L	D	H	P	T	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T