PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3innB_

Fold library id	PDB Header	Molecule	Title
c3innB_	PDB header: ligase	Chain: B: PDB Molecule: pantothenate synthetase;	PDBTitle: crystal structure of pantoate-beta-alanine-ligase in complex2 with atp at low occupancy at 2.1 a resolution

Links to external resources
Added to library: Sat Aug 28 20:20:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S M Q I I H T I E E L R Q A L A P A R Q Q G K K I G F V P T M G Y L H K G H L E L V R R A R V E N D V T L V S I F V N P L Q F G A N L E R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
S
G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A G L L H D A Q V D Y L F A P T V S D M Y P R P M Q T V V D V P P L G N Q I E G E A R P G H F A G V A T V V S K L F N I V G P D A A Y F G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
T S G G G T T
S
T T
S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K D F Q Q L V I I R R M V D D M A I P V R I V G V E T V R E D D G L A C S S R N V Y L T P E Q R R A A I I V P Q A L D E A D R L Y R S G M D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T
B
T T S
B
G G G G G
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . .

Sequence D P D A L E A A I R T F I G R Q P L A V P E V I A I R D P E T L E R L P A L Q G R P I L V A L F V R V G A T R L L D N R V I G H A A P Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S T T
T T T
S
T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	M	Q	I	I	H	T	I	E	E	L	R	Q	A	L	A	P	A	R	Q	Q	G	K	K	I	G	F	V	P	T	M	G	Y	L	H	K	G	H	L	E	L	V	R	R	A	R	V	E	N	D	V	T	L	V	S	I	F	V	N	P	L	Q	F	G	A	N	L	E	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S														T	T										S																		S										G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	L	L	H	D	A	Q	V	D	Y	L	F	A	P	T	V	S	D	M	Y	P	R	P	M	Q	T	V	V	D	V	P	P	L	G	N	Q	I	E	G	E	A	R	P	G	H	F	A	G	V	A	T	V	V	S	K	L	F	N	I	V	G	P	D	A	A	Y	F	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		S												S	S													T	S	G	G	G	T	T		S		T	T																	S						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	D	F	Q	Q	L	V	I	I	R	R	M	V	D	D	M	A	I	P	V	R	I	V	G	V	E	T	V	R	E	D	D	G	L	A	C	S	S	R	N	V	Y	L	T	P	E	Q	R	R	A	A	I	I	V	P	Q	A	L	D	E	A	D	R	L	Y	R	S	G	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S														T	T												B		T	T	S		B			G	G	G	G	G									T	T															T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Sequence	D	P	D	A	L	E	A	A	I	R	T	F	I	G	R	Q	P	L	A	V	P	E	V	I	A	I	R	D	P	E	T	L	E	R	L	P	A	L	Q	G	R	P	I	L	V	A	L	F	V	R	V	G	A	T	R	L	L	D	N	R	V	I	G	H	A	A	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	S	T	T											T	T	T					S			T	T	S											T	T