Email l.a.kelley@imperial.ac.uk Description P46130 Date Thu Jan 5 12:04:05 GMT 2012 Unique Job ID 6be7df39e593cd44

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3grhA_ 100.0 100 PDB header:hydrolase Chain: A: PDB Molecule:acyl-coa thioester hydrolase ybgc; PDBTitle: crystal structure of escherichia coli ybhc 2 d1gq8a_ 100.0 30 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectin methylesterase 3 c1xg2A_ 100.0 29 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:pectinesterase 1; PDBTitle: crystal structure of the complex between pectin2 methylesterase and its inhibitor protein 4 d1qjva_ 100.0 26 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectin methylesterase 5 d1ofla_ 99.0 13 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Chondroitinase B 6 c1dbgA_ 98.9 13 PDB header:lyase Chain: A: PDB Molecule:chondroitinase b; PDBTitle: crystal structure of chondroitinase b 7 d1ru4a_ 98.9 16 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate transeliminase 8 d1bhea_ 98.7 11 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 9 c3eqnB_ 98.7 15 PDB header:hydrolase Chain: B: PDB Molecule:glucan 1,3-beta-glucosidase; PDBTitle: crystal structure of beta-1,3-glucanase from phanerochaete2 chrysosporium (lam55a) 10 d1czfa_ 98.5 14 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 11 c1czfB_ 98.5 13 PDB header:hydrolase Chain: B: PDB Molecule:polygalacturonase ii; PDBTitle: endo-polygalacturonase ii from aspergillus niger 12 c2pyhB_ 98.4 13 PDB header:isomerase Chain: B: PDB Molecule:poly(beta-d-mannuronate) c5 epimerase 4; PDBTitle: azotobacter vinelandii mannuronan c-5 epimerase alge4 a-module2 complexed with mannuronan trisaccharide 13 c2iq7D_ 98.2 15 PDB header:hydrolase Chain: D: PDB Molecule:endopolygalacturonase; PDBTitle: crystal structure of the polygalacturonase from colletotrichum lupini2 and its implications for the interaction with polygalacturonase-3 inhibiting proteins 14 d1nhca_ 98.0 13 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 15 c2uveA_ 98.0 16 PDB header:hydrolase Chain: A: PDB Molecule:exopolygalacturonase; PDBTitle: structure of yersinia enterocolitica family 282 exopolygalacturonase 16 c2inuC_ 98.0 14 PDB header:lyase Chain: C: PDB Molecule:insulin fructotransferase; PDBTitle: crystal structure of insulin fructotransferase in the absence of2 substrate 17 d1hg8a_ 98.0 15 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 18 d1ia5a_ 97.9 12 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 19 c3jurA_ 97.7 14 PDB header:hydrolase Chain: A: PDB Molecule:exo-poly-alpha-d-galacturonosidase; PDBTitle: the crystal structure of a hyperthermoactive exopolygalacturonase from2 thermotoga maritima 20 d1rmga_ 97.2 10 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 21 c3gqnA_ not modelled 96.9 15 PDB header:viral protein Chain: A: PDB Molecule:preneck appendage protein; PDBTitle: crystal structure of the pre-mature bacteriophage phi29 gene product2 12 22 c3gq8A_ not modelled 96.5 12 PDB header:viral protein Chain: A: PDB Molecule:preneck appendage protein; PDBTitle: crystal structure of the bacteriophage phi29 gene product2 12 n-terminal fragment in complex with 2-(n-3 cyclohexylamino)ethane sulfonic acid (ches) 23 c2qy1B_ not modelled 96.4 21 PDB header:lyase Chain: B: PDB Molecule:pectate lyase ii; PDBTitle: pectate lyase a31g/r236f from xanthomonas campestris 24 d1idka_ not modelled 96.0 28 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectin lyase 25 d1pcla_ not modelled 95.6 21 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 26 d1qcxa_ not modelled 95.2 25 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectin lyase 27 d1bn8a_ not modelled 95.0 18 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 28 d1k5ca_ not modelled 94.9 12 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Galacturonase 29 d1pe9a_ not modelled 93.9 27 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 30 d1ogmx2 not modelled 93.4 11 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Dextranase, catalytic domain 31 d1o88a_ not modelled 93.4 21 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 32 c2vjjA_ not modelled 92.8 19 PDB header:viral protein Chain: A: PDB Molecule:tailspike protein; PDBTitle: tailspike protein of e.coli bacteriophage hk620 in complex2 with hexasaccharide 33 c1vblA_ not modelled 92.4 23 PDB header:lyase Chain: A: PDB Molecule:pectate lyase 47; PDBTitle: structure of the thermostable pectate lyase pl 47 34 c2z8gB_ not modelled 85.1 15 PDB header:hydrolase Chain: B: PDB Molecule:isopullulanase; PDBTitle: aspergillus niger atcc9642 isopullulanase complexed with isopanose 35 d1pxza_ not modelled 85.0 19 Fold:Single-stranded right-handed beta-helix Superfamily:Pectin lyase-like Family:Pectate lyase-like 36 c1ogoX_ not modelled 41.2 13 PDB header:hydrolase Chain: X: PDB Molecule:dextranase; PDBTitle: dex49a from penicillium minioluteum complex with isomaltose 37 d1j83a_ not modelled 18.8 23 Fold:Galactose-binding domain-like Superfamily:Galactose-binding domain-like Family:Family 17 carbohydrate binding module, CBM17 38 c3cegA_ not modelled 18.1 26 PDB header:ligase Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 6; PDBTitle: crystal structure of the ubc domain of baculoviral iap2 repeat-containing protein 6 39 d1acoa1 not modelled 16.2 20 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like 40 c2l02B_ not modelled 12.3 45 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of protein bt2368 from bacteroides2 thetaiotaomicron, northeast structural genomics consortium target3 btr375 41 c2p4gA_ not modelled 10.9 7 PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a pyrimidine reductase-like protein (dip1392)2 from corynebacterium diphtheriae nctc at 2.30 a resolution 42 c3owvA_ not modelled 10.0 7 PDB header:hydrolase Chain: A: PDB Molecule:dna-entry nuclease; PDBTitle: structural insights into catalytic and substrate binding mechanisms of2 the strategic enda nuclease from streptococcus pneumoniae 43 c2vbeA_ not modelled 9.9 29 PDB header:viral protein Chain: A: PDB Molecule:tailspike-protein; PDBTitle: tailspike protein of bacteriophage sf6 44 d1dmla1 not modelled 9.8 20 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 45 c2xz8A_ not modelled 9.1 33 PDB header:immune system Chain: A: PDB Molecule:peptidoglycan-recognition protein lf; PDBTitle: crystal structure of the lfw ectodomain of the2 peptidoglycan recognition protein lf 46 c1dmlG_ not modelled 8.9 20 PDB header:dna binding protein/transferase Chain: G: PDB Molecule:dna polymerase processivity factor; PDBTitle: crystal structure of herpes simplex ul42 bound to the c-2 terminus of hsv pol 47 c2rfyB_ not modelled 8.9 36 PDB header:hydrolase Chain: B: PDB Molecule:cellulose 1,4-beta-cellobiosidase; PDBTitle: crystal structure of cellobiohydrolase from melanocarpus2 albomyces complexed with cellobiose 48 d2nn6h3 not modelled 8.4 17 Fold:Eukaryotic type KH-domain (KH-domain type I) Superfamily:Eukaryotic type KH-domain (KH-domain type I) Family:Eukaryotic type KH-domain (KH-domain type I) 49 c2qyvB_ not modelled 7.8 19 PDB header:hydrolase Chain: B: PDB Molecule:xaa-his dipeptidase; PDBTitle: crystal structure of putative xaa-his dipeptidase (yp_718209.1) from2 haemophilus somnus 129pt at 2.11 a resolution 50 d1autl2 not modelled 7.7 40 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:EGF-type module 51 d1ckva_ not modelled 7.6 50 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein 52 c3b4qA_ not modelled 7.5 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a conserved protein domain (unknown2 function) from corynebacterium diphtheriae 53 c3ep1B_ not modelled 7.1 38 PDB header:immune system Chain: B: PDB Molecule:pgrp-hd - peptidoglycan recognition protein PDBTitle: structure of the pgrp-hd from alvinella pompejana 54 d2cu8a1 not modelled 7.0 21 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 55 c3gw6F_ not modelled 6.6 21 PDB header:chaperone Chain: F: PDB Molecule:endo-n-acetylneuraminidase; PDBTitle: intramolecular chaperone 56 d1hqia_ not modelled 6.0 67 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein 57 d1ex4a1 not modelled 5.8 37 Fold:SH3-like barrel Superfamily:DNA-binding domain of retroviral integrase Family:DNA-binding domain of retroviral integrase 58 d1el6a_ not modelled 5.8 25 Fold:Baseplate structural protein gp11 Superfamily:Baseplate structural protein gp11 Family:Baseplate structural protein gp11 59 d2moba_ not modelled 5.6 40 Fold:Monooxygenase (hydroxylase) regulatory protein Superfamily:Monooxygenase (hydroxylase) regulatory protein Family:Monooxygenase (hydroxylase) regulatory protein 60 c2mobA_ not modelled 5.6 40 PDB header:oxidoreductase Chain: A: PDB Molecule:protein (methane monooxygenase regulatory PDBTitle: methane monooxygenase component b 61 c3rlcA_ not modelled 5.2 21 PDB header:structural protein Chain: A: PDB Molecule:a1 protein; PDBTitle: crystal structure of the read-through domain from bacteriophage qbeta2 a1 protein, hexagonal crystal form 62 d1k4ia_ not modelled 5.1 10 Fold:YrdC/RibB Superfamily:YrdC/RibB Family:3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB 63 d1xpaa2 not modelled 5.1 27 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain 64 c1s2jA_ not modelled 5.0 25 PDB header:hydrolase Chain: A: PDB Molecule:peptidoglycan recognition protein sa cg11709-pa; PDBTitle: crystal structure of the drosophila pattern-recognition2 receptor pgrp-sa 65 d1jb0d_ not modelled 5.0 14 Fold:Photosystem I subunit PsaD Superfamily:Photosystem I subunit PsaD Family:Photosystem I subunit PsaD