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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1dmlG_

Fold library idPDB HeaderMoleculeTitle
c1dmlG_PDB header: dna binding protein/transferaseChain: G: PDB Molecule: dna polymerase processivity factor;PDBTitle: crystal structure of herpes simplex ul42 bound to the c-2 terminus of hsv pol


Added to library: Tue Mar 16 14:22:23 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAPCQVVLQGAELNGILQAFAPLRTSLLDSLLVMGDRGILIHNTIFGEQVFLPLEHSQFSRYRWRGPTAA
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Known secondary structure (DSSP)

STTTTTTTTTSS
TTTTGGGSS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FLSLVDQKRSLLSVFRANQYPDLRRVELAITGQAPFRTLVQRIWTTTSDGEAVELASETLMKRELTSFVV
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Known secondary structure (DSSP) SBSSSS
BTTGGGSTTS
TT

S
TTS

SSSS
GGG


SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence LVPQGTPDVQLRLTRPQLTKVLNATGADSATPTTFELGVNGKFSVFTTSTCVTFAAREEGVSSSTSTNAK
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Known secondary structure (DSSP)



S

S

TS

SSSS

GGGTT



TT
 .........220.........230.........240.........250.........260.........270.....
Sequence TVYGENTHRTFSVVVDDCSMRAVLRRLQVGGGTLKFFLTTPVPSLCVTATGPNAVSAVFLLKPQK
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Known secondary structure (DSSP) STTS

S

TT



SSSS

SSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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