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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1rmga_

Fold library idFoldSuperfamilyFamily
d1rmga_Single-stranded right-handed beta-helixPectin lyase-likeGalacturonase


Added to library: Tue Mar 16 12:57:22 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QLSGSVGPLTSASTKGATKTCNILSYGAVADNSTDVGPAITSAWAACKSGGLVYIPSGNYALNTWVTLTG
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Known secondary structure (DSSP)

SS

S
SS

GGGGT


SSSSB
TBT

SS
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GSATAIQLDGIIYRTGTASGNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSV
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Known secondary structure (DSSP)

S



SS
SSS



TTTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence HDIILVDAPAFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWGSNIWVHDVEVTNKDECVTVKSPANNIL
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Known secondary structure (DSSP)

SS
S

SSTT

SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VESIYCNWSGGCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNGGSGTVSNVLLENFIGHGNAYSLDI
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Known secondary structure (DSSP) SSS
TTSSS
SBB

S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGYWSSMTAVAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLC
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Known secondary structure (DSSP) TB
TTS

BSSS

S
TTTS
S
BTTB
SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RSAYGSGYCLKDSSSHTSYTTTSTVTAAPSGYSATTMAADLATAFGLTASIPIPTIPTSFYPGLTPYSAL
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Known secondary structure (DSSP) SSTT
B

SS




S

TT





TT

SS


SSS







S

STT


SS

 ..
Sequence AG
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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