Fold library entry viewer: c3eqnB_

Added to library: Tue Mar 16 12:32:27 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	G	S	T	C	S	S	P	L	T	H	G	S	A	A	P	G	D	P	F	W	L	Q	N	I	Q	H	Q	G	I	A	A	F	N	G	N	P	G	G	Y	P	V	F	R	N	V	K	N	Y	G	A	K	G	D	G	N	T	D	D	T	A	A	I	Q	A	A	I	N	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		S	S				S					T	T	S							S							T	T	S	S		T	T	T			S				G	G	G	G	T																			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	R	C	G	Q	G	C	D	S	T	T	T	Q	P	A	L	V	Y	F	P	P	G	T	Y	K	V	S	S	P	L	V	V	L	Y	Q	T	Q	L	I	G	D	A	K	N	L	P	T	L	L	A	A	P	N	F	S	G	I	A	L	I	D	A	D	P	Y	L	A	G	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S		T	T					S	S	S								S	S					S	S						T	T							S	S	S								T	T			S	S		S			S	S		B		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	Y	Y	V	N	Q	N	N	F	F	R	S	V	R	N	F	V	I	D	L	R	Q	V	S	G	S	A	T	G	I	H	W	Q	V	S	Q	A	T	S	L	I	N	I	V	F	Q	M	S	T	A	A	G	N	Q	H	Q	G	I	F	M	E	N	G	S	G	G	F	L	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S		G	G	G														T	T		S	S											S	S													S	T	T										S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	V	F	N	G	G	N	I	G	A	T	F	G	N	Q	Q	F	T	V	R	N	L	T	F	N	N	A	N	T	A	I	N	A	I	W	N	W	G	W	T	F	Q	R	I	T	I	N	N	C	Q	V	G	F	D	L	T	Q	G	G	T	S	N	T	G	A	Q	G	V	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S								S											S		S								B	S											S		S										S	S	T	T	S				B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	A	I	I	D	A	V	V	T	N	T	Q	T	F	V	R	W	S	G	A	S	S	G	H	L	Q	G	S	L	V	L	N	N	I	Q	L	T	N	V	P	V	A	V	G	V	K	G	G	P	T	V	L	A	G	G	T	T	T	I	N	S	W	A	Q	G	N	V	Y	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S		S						S	S				S	S		S	S																			T	T	S																						T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	N	G	N	P	T	F	T	Q	G	N	I	A	N	I	N	R	P	G	V	L	L	D	S	T	G	R	I	V	S	K	S	H	P	Q	Y	T	G	Y	A	P	S	D	F	V	S	V	R	S	Q	G	A	K	G	D	G	H	T	D	D	T	Q	A	I	K	N	V	F	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S						G	G	G	B		T	T	S	S	B									T	T			G	G	G				T	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	A	G	C	K	I	I	F	F	D	A	G	T	Y	I	V	T	D	T	I	Q	I	P	A	G	T	Q	I	V	G	E	V	W	S	V	I	M	G	T	G	S	K	F	T	D	Y	N	N	P	Q	P	V	I	Q	V	G	A	P	G	S	S	G	V	V	E	I	T	D	M	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	S						S						S	S						T	T							S	S							S	G	G	G			T	T	S								S		T	T		B	S						S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	T	T	R	G	P	A	A	G	A	I	I	V	E	W	N	V	H	D	P	S	G	Q	Q	A	A	A	G	A	W	D	T	H	L	I	I	G	G	T	A	Q	S	G	L	Q	V	G	Q	C	P	T	S	G	A	G	G	N	N	C	F	A	D	F	L	G	L	H	L	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S			T	T									B			T	T		T	T						S		B				S	S	S	T	T	S	S		S	T	T	T			T	T		T	T	G	G	G	G											T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	S	S	A	Y	L	E	G	M	W	V	W	L	A	D	H	D	L	D	S	G	G	S	Q	Q	I	S	L	W	S	N	G	G	I	M	S	E	S	Q	G	P	V	W	L	I	G	T	A	S	E	H	H	I	N	Y	Q	Y	F	L	K	N	A	A	N	H	Y	I	G	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							S							S	B		S	S	S	S	T	T		B															S											S		S	S							S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	T	E	T	P	Y	F	Q	P	N	P	N	P	P	A	P	F	I	T	N	S	N	F	D	P	S	Q	L	G	Q	G	D	A	W	A	M	T	V	Q	N	S	H	G	I	L	V	F	G	A	G	F	Y	S	F	F	S	A	Y	N	T	G	C	Q	S	P	Q	N	C	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	S	S		T	T	T	T	S				T	T	T	S		S	S			S	S	S								S																B	T	T	B		G	G	G	T	T	T		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Sequence	Q	I	V	N	V	D	S	S	S	D	I	A	F	Y	S	L	T	T	V	D	T	T	W	Q	F	S	V	N	A	Q	G	V	I	N	R	S	N	N	P	N	G	F	A	D	T	I	T	A	W	T	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S												S								T	T						G	G	G		B		S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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