Fold library entry viewer: c3gqnA_

Added to library: Sat Aug 28 21:26:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	F	A	D	L	V	I	Q	V	I	D	E	L	K	Q	F	G	V	S	V	K	T	Y	G	A	K	G	D	G	V	T	D	D	I	R	A	F	E	K	A	I	E	S	G	F	P	V	Y	V	P	Y	G	T	F	M	V	S	R	G	I	K	L	P	S	N	T	V	L	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S	S			S	G	G	G	T																			T	T	S						S						S	S						S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	K	R	N	A	V	I	R	F	M	D	S	V	G	R	G	E	S	L	M	Y	N	E	N	V	T	T	G	N	E	N	I	F	L	S	S	F	T	L	D	G	N	N	K	R	L	G	Q	G	I	S	G	I	G	G	S	R	E	S	N	L	S	I	R	A	C	H	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			S	S			S				S		T	T	T																G	G	G	G		S	S				S	S	T	T	T	T		S					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	I	R	D	I	E	A	V	D	C	T	L	H	G	I	D	I	T	C	G	G	L	D	Y	P	Y	L	G	D	G	T	T	A	P	N	P	S	E	N	I	W	I	E	N	C	E	A	T	G	F	G	D	D	G	I	T	T	H	H	S	Q	Y	I	N	I	L	N	C	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S	S		S						S	S	S	S						T	T				S	S									S					S		S	S		S					S								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	D	P	R	L	T	A	N	C	N	G	F	E	I	D	D	G	S	R	H	V	V	L	S	N	N	R	S	K	G	C	Y	G	G	I	E	I	K	A	H	G	D	A	P	A	A	Y	N	I	S	I	N	G	H	M	S	V	E	D	V	R	S	Y	N	F	R	H	I	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	S	S			S					T	T													S	S	S									T	T	S															S		S								T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	H	A	A	T	A	P	Q	S	V	S	A	K	N	I	V	A	S	N	L	V	S	I	R	P	N	N	K	R	G	F	Q	D	N	A	T	P	R	V	L	A	V	S	A	Y	Y	G	V	V	I	N	G	L	T	G	Y	T	D	D	P	N	L	L	T	E	T	V	V	S	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S	S				S	S													S				S	S															S														S		T	T	S			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	R	A	R	N	C	S	L	N	G	V	V	L	T	G	F	S	N	S	E	N	G	I	Y	V	I	G	G	S	R	G	G	D	A	V	N	I	S	N	V	T	L	N	N	S	G	R	Y	G	V	S	I	G	S	G	I	E	N	V	S	I	T	N	I	S	G	I	G	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T													S		T	T		S								S	T	T														S			S							T	T														T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	N	S	P	V	A	L	V	S	T	I	N	S	N	P	E	I	S	G	L	S	S	I	G	Y	P	T	V	A	R	V	A	G	T	D	Y	N	D	G	L	T	L	F	N	G	A	F	R	A	S	T	T	S	S	G	K	I	H	S	E	G	F	I	M	G	S	T	S	G	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S								S	S	S		S									S		S						S	S				T	T				B			S	S				S		S							T	T					S		B	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	A	S	V	S	K	S	G	V	L	T	S	S	S	S	K	T	S	S	E	R	S	L	I	A	G	S	S	T	S	E	A	K	G	T	Y	N	T	I	L	G	S	L	G	A	V	A	D	E	Q	F	A	A	L	I	S	A	S	Q	S	R	A	S	G	N	H	N	L	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T					S		B	S												S		B	S					S							S								S	T	T													S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	S	Y	G	I	N	T	T	G	S	Y	K	V	N	G	G	F	E	K	I	N	W	E	L	D	S	L	N	G	R	I	K	A	R	D	T	V	T	G	G	N	T	W	S	D	F	A	E	Y	F	E	S	L	G	G	Q	V	I	E	T	G	Y	L	V	T	L	E	K	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						T	T						B	S	S							T	T	T	T					S	S							S	S									B	G	G	G					T	T							T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	R	K	A	E	K	G	E	K	I	I	G	V	I	S	E	T	A	G	F	V	L	G	E	S	S	F	E	W	Q	G	A	V	L	K	N	E	F	G	G	I	I	Y	E	E	V	T	T	E	D	G	V	K	F	K	R	P	L	P	N	P	D	F	D	P	N	K	N	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T									S											S	S		G	G	G	B		B		T	T	S		B								S	S	S								B		T	T			T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
Sequence	P	R	S	Q	R	R	E	W	H	V	V	G	L	L	G	Q	I	A	V	R	I	D	E	T	V	K	Q	G	H	S	I	D	A	V	G	G	V	A	T	D	G	D	N	F	I	V	Q	E	I	T	T	P	Y	T	K	E	K	G	Y	G	V	A	I	V	L	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T		S	S																T	T			T	T	S						T	T						S	B	S											T	T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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