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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2iq7D_

Fold library idPDB HeaderMoleculeTitle
c2iq7D_PDB header: hydrolaseChain: D: PDB Molecule: endopolygalacturonase;PDBTitle: crystal structure of the polygalacturonase from2 colletotrichum lupini and its implications for the3 interaction with polygalacturonase-inhibiting proteins


Added to library: Tue Mar 16 12:05:43 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASCTFTDAAAAIKGKASCTSIILNGIVVPAGTTLDMTGLKSGTTVTFQGKTTFGYKEWEGPLISFSGTNI
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Known secondary structure (DSSP)
SSGGG
SS

TT


S

TT
S



S


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NINGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVI
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Known secondary structure (DSSP)
TT


GGGT

S
TTSSSS








SS

S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGGHGLSIGSVGGRSD
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Known secondary structure (DSSP)
GGGGGTT

S

SS
S

SS
SSSS
SS

SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NTVKTVTISNSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTNGVP
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Known secondary structure (DSSP)
S
STT


SSTT
S


SSS
 .........290.........300.........310.........320.........330.........
Sequence ITGLTLSKITGSVASSGTNVYILCASGACSNWKWSGVSVTGGKKSTKCSNIPSGSGAAC
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Known secondary structure (DSSP)
TTS

TT
SSB

S

B


TTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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