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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1pcla_

Fold library idFoldSuperfamilyFamily
d1pcla_Single-stranded right-handed beta-helixPectin lyase-likePectate lyase-like


Added to library: Tue Mar 16 13:55:10 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVETDAATTGWATQNGGTTGGAKAAKAVEVKNISDFKKALNGTDSSAKIIKVTGPIDISGGKAYTSFDDQ
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Known secondary structure (DSSP)
TTT



SSGGGSSS



S
S
S

SST
SS

S


S
TTTT



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KARSQISIPSNTTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDN
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Known secondary structure (DSSP)

SS
TT

SS
S
S




SS
B
SSSSS
B



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence STNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQ
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Known secondary structure (DSSP)
S


SS
GGG

TT





S
TT
B
S
SS

B

S
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DSGKLRVTFHNNVFDRVTERAPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSN
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Known secondary structure (DSSP) TT


S

S
SSSS

S
SS
SSS



S

SS

S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LKSIDGKNPECSIVKQFNSKVFSDKGSLVNGSTTTKLDTCGLTAYKPTLPYKYSAQTMTSSLATSINNNA
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Known secondary structure (DSSP)


SSSS
SGGGGSB
TT

B
S
TTBS

GGGSS

B





SS







T
 .....
Sequence GYGKL
Predicted secondary structure




SS confidence




Known secondary structure (DSSP) SGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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