Fold library entry viewer: c1dbgA_

Added to library: Tue Mar 16 14:26:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	V	V	A	S	N	E	T	L	Y	Q	V	V	K	E	V	K	P	G	G	L	V	Q	I	A	D	G	T	Y	K	D	V	Q	L	I	V	S	N	S	G	K	S	G	L	P	I	T	I	K	A	L	N	P	G	K	V	F	F	T	G	D	A	K	V	E	L	R	G	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S													T	T							S					T										B	T	T	B							S	S	T	T	S						S							S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	I	L	E	G	I	W	F	K	D	G	N	R	A	I	Q	A	W	K	S	H	G	P	G	L	V	A	I	Y	G	S	Y	N	R	I	T	A	C	V	F	D	C	F	D	E	A	N	S	A	Y	I	T	T	S	L	T	E	D	G	K	V	P	Q	H	C	R	I	D	H	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S										T	T	T			T	T	S			S					S	S	S					S					S			S	S		S		S							T	T						S					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	F	T	D	K	I	T	F	D	Q	V	I	N	L	N	N	T	A	R	A	I	K	D	G	S	V	G	G	P	G	M	Y	H	R	V	D	H	C	F	F	S	N	P	Q	K	P	G	N	A	G	G	G	I	R	I	G	Y	Y	R	N	D	I	G	R	C	L	V	D	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S		S					S	S				S				S												S									S	S	S				S					S	S	T	T		B							S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	F	M	R	Q	D	S	E	A	E	I	I	T	S	K	S	Q	E	N	V	Y	Y	G	N	T	Y	L	N	C	Q	G	T	M	N	F	R	H	G	D	H	Q	V	A	I	N	N	F	Y	I	G	N	D	Q	R	F	G	Y	G	G	M	F	V	W	G	S	R	H	V	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S							S	B	S					S					S		S	S								S	S					S							S	S	S	S		B							S	B	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	C	N	Y	F	E	L	S	E	T	I	K	S	R	G	N	A	A	L	Y	L	N	P	G	A	M	A	S	E	H	A	L	A	F	D	M	L	I	A	N	N	A	F	I	N	V	N	G	Y	A	I	H	F	N	P	L	D	E	R	R	K	E	Y	C	A	A	N	R	L	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	S	B		G	G	G	T	S								B		T	T	S	T	T				B	S					S					S		S	S					S	S	T	T											T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	T	P	H	Q	L	M	L	K	G	N	L	F	F	K	D	K	P	Y	V	Y	P	F	F	K	D	D	Y	F	I	A	G	K	N	S	W	T	G	N	V	A	L	G	V	E	K	G	I	P	V	N	I	S	A	N	R	S	A	Y	K	P	V	K	I	K	D	I	Q	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B				S					S							S	S					S				T	T			T	T	S	S				S					S	S			S	S	S				B			S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Sequence	E	G	I	A	L	D	L	N	A	L	I	S	K	G	I	T	G	K	P	L	S	W	D	E	V	R	P	Y	W	L	K	E	M	P	G	T	Y	A	L	T	A	R	L	S	A	D	R	A	A	K	F	K	A	V	I	K	R	N	K	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T													S		S					G	G	G	T	S		T	T			S			S	S					S																	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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