Fold library entry viewer: c1ogoX_

Added to library: Tue Mar 16 14:27:04 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	A	N	T	H	C	G	A	D	F	C	T	W	W	H	D	S	G	E	I	N	T	Q	T	P	V	Q	P	G	N	V	R	Q	S	H	K	Y	S	V	Q	V	S	L	A	G	T	N	N	F	H	D	S	F	V	Y	E	S	I	P	R	N	G	N	G	R	I	Y	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B	S	S	S							T	T					S	S	S				T	T				B		S	S								T	T	S													G	G	G	G	T		S		S	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	D	P	P	N	S	N	T	L	D	S	S	V	D	D	G	I	S	I	E	P	S	I	G	L	N	M	A	W	S	Q	F	E	Y	S	H	D	V	D	V	K	I	L	A	T	D	G	S	S	L	G	S	P	S	D	V	V	I	R	P	V	S	I	S	Y	A	I	S	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		T	T				S		T	T				S		S	S					T											S	S									T	T	S						G	G	G					S	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	D	G	G	I	V	I	R	V	P	A	D	A	N	G	R	K	F	S	V	E	F	K	T	D	L	Y	T	F	L	S	D	G	N	E	Y	V	T	S	G	G	S	V	V	G	V	E	P	T	N	A	L	V	I	F	A	S	P	F	L	P	S	G	M	I	P	H	M	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S										T	T									G	G	G								S	S	S			S	S	S	S								S													G	G	G	S					T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	N	T	Q	T	M	T	P	G	P	I	N	N	G	D	W	G	A	K	S	I	L	Y	F	P	P	G	V	Y	W	M	N	Q	D	Q	S	G	N	S	G	K	L	G	S	N	H	I	R	L	N	S	N	T	Y	W	V	Y	L	A	P	G	A	Y	V	K	G	A	I	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S					T	T	T	T		S	S	S						S							B		T	T			B	S		S	S	S							T	T								T	T					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	T	K	Q	N	F	Y	A	T	G	H	G	I	L	S	G	E	N	Y	V	Y	Q	A	N	A	G	D	N	Y	I	A	V	K	S	D	S	T	S	L	R	M	W	W	H	N	N	L	G	G	G	Q	T	W	Y	C	V	G	P	T	I	N	A	P	P	F	N	T	M	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S						S	S						T	T	S		T	T		B	T	T	T	T	T	B	S				T	T	T	B			S					S			S	S							S							S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	G	N	S	G	I	S	S	Q	I	S	D	Y	K	Q	V	G	A	F	F	F	Q	T	D	G	P	E	I	Y	P	N	S	V	V	H	D	V	F	W	H	V	N	D	D	A	I	K	I	Y	Y	S	G	A	S	V	S	R	A	T	I	W	K	C	H	N	D	P	I	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S																S	T	T					B			T	T											S	S		S					S	T	T												S	S	S		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	M	G	W	T	S	R	D	I	S	G	V	T	I	D	T	L	N	V	I	H	T	R	Y	I	K	S	E	T	V	V	P	S	A	I	I	G	A	S	P	F	Y	A	S	G	M	S	P	D	S	R	K	S	I	S	M	T	V	S	N	V	V	C	E	G	L	C	P	S	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																				S	S			T	T	T	T										S	S	S	S																				S	S	B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	I	T	P	L	Q	N	Y	K	N	F	V	V	K	N	V	A	F	P	D	G	L	Q	T	N	S	I	G	T	G	E	S	I	I	P	A	A	S	G	L	T	M	G	L	A	I	S	A	W	T	I	G	G	Q	K	V	T	M	E	N	F	Q	A	N	S	L	G	Q	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S														T	T		B			S	T	T		T	T								T	T													T	T					T	T	T		S	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.
Sequence	I	D	G	S	Y	W	G	E	W	Q	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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