PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3owvA_

Fold library id	PDB Header	Molecule	Title
c3owvA_	PDB header: hydrolase	Chain: A: PDB Molecule: dna-entry nuclease;	PDBTitle: structural insights into catalytic and substrate binding mechanisms of2 the strategic enda nuclease from streptococcus pneumoniae

Links to external resources
Added to library: Tue Dec 28 19:55:38 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S E A P S Q A L A E S V L T D A V K S Q I K G S L E W N G S G A F I V N G N K T N L D A K V S S K P Y A D N K T K T V G K E T V P T V A N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S
S S S
G G G
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L L S K A T R Q Y S W T P P G W H Q V K N L K G S Y T H A V D R G A L L G Y A L I G G L D G F D A S T S N P K N I A V Q T A W A N Q A Q A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
S
S S S
S S S S S
T T S T T
S T T
T T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y S T G Q N Y Y E S K V R K A L D Q N K R V R Y R V T L Y Y A S N E D L V P S A S Q I E A K S S D G E L E F N V L V P N V Q K G L Q L D Y R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S S T T
S S
S T T S S
S
T T
T T

. . . . . . . .

Sequence T G E V T V T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	E	A	P	S	Q	A	L	A	E	S	V	L	T	D	A	V	K	S	Q	I	K	G	S	L	E	W	N	G	S	G	A	F	I	V	N	G	N	K	T	N	L	D	A	K	V	S	S	K	P	Y	A	D	N	K	T	K	T	V	G	K	E	T	V	P	T	V	A	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T							T	T			S						S	S	S					G	G	G																						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	S	K	A	T	R	Q	Y	S	W	T	P	P	G	W	H	Q	V	K	N	L	K	G	S	Y	T	H	A	V	D	R	G	A	L	L	G	Y	A	L	I	G	G	L	D	G	F	D	A	S	T	S	N	P	K	N	I	A	V	Q	T	A	W	A	N	Q	A	Q	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G								T	T						S		S	S	S		S	S	S						S	S						T	T	S	T	T				S	T	T		T	T	T														T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	S	T	G	Q	N	Y	Y	E	S	K	V	R	K	A	L	D	Q	N	K	R	V	R	Y	R	V	T	L	Y	Y	A	S	N	E	D	L	V	P	S	A	S	Q	I	E	A	K	S	S	D	G	E	L	E	F	N	V	L	V	P	N	V	Q	K	G	L	Q	L	D	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																	T	T												S	S	T	T		S	S		S									T	T	S	S									S			T	T					T	T
	.	.	.	.	.	.	.	.
Sequence	T	G	E	V	T	V	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T