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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2qy1B_

Fold library idPDB HeaderMoleculeTitle
c2qy1B_PDB header: lyaseChain: B: PDB Molecule: pectate lyase ii;PDBTitle: pectate lyase a31g/r236f from xanthomonas campestris


Added to library: Tue Mar 16 14:20:02 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPVGYGAGTTGGGNKVPVNVATFEAMQSAIDSYSGSGGLVLNYTGKFDFGTIKDVCAQWKLPAKTVQIKN
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Known secondary structure (DSSP)


STTTT

TTTTS


SS
SSS


B

GGG


GGGSTTS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KSDVTIKGANGSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASL
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Known secondary structure (DSSP)

S
TT
BBSSSS
S
S
SSGGG

S
BTTB

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence TKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPL
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Known secondary structure (DSSP)


TT
TT
SS
BSTT
S


SSSTT
GGGGG
S

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QRFGLSHIYNNYFNNVTTSGINVRMGGIAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITWGTP
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Known secondary structure (DSSP) SSS

S
STT
S
SS
SSSSB
S

S




 .........290.........300.........310.........320.........330
Sequence DGSKPYANATNWISTKVFPESLGYIYTVTPAAQVKAKVIATAGAGKNLAE
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Known secondary structure (DSSP) SSSS


TT


SS


S


S





GGG
STTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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