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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1qcxa_

Fold library idFoldSuperfamilyFamily
d1qcxa_Single-stranded right-handed beta-helixPectin lyase-likePectin lyase


Added to library: Tue Mar 16 12:37:27 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETTTGCAPWGTAS
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Known secondary structure (DSSP)



S


GGGTT

TTTT


B


SSSS

S
TTTT

TT
SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence QCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNI
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Known secondary structure (DSSP) TB

GGG
TTS
GGGTS


SS
TT

S

TT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHH
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Known secondary structure (DSSP)
TTTS

SS


S
SS
S
SS

S

B
SSBTTSSSBB
 .........220.........230.........240.........250.........260.........270.........280
Sequence YWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVN
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Known secondary structure (DSSP) S



SSS
SB
S
TT
SSS

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGAIAQW
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Known secondary structure (DSSP)
SS
SS


SGGGSS




S





B
GGGGGGGTTS






GGG
 .........
Sequence TMKNAGQGK
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Known secondary structure (DSSP) SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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