Fold library entry viewer: c2vjjA_

Added to library: Tue Mar 16 13:08:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	Q	F	R	A	I	I	E	S	P	E	G	A	G	H	V	G	Y	Q	Y	R	R	N	T	G	S	T	M	R	M	V	S	D	V	L	D	E	R	V	S	L	W	D	F	H	C	D	P	S	G	N	V	I	Q	P	G	P	N	V	D	S	R	Q	Y	L	Q	A	A	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	T	T	G	G	G	G	S				G	G	G		T	T	S										T	T			B	G	G	G	T		B		T	T	S		B				S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	V	S	S	N	G	G	G	T	I	T	I	P	A	G	Y	T	W	Y	L	G	S	Y	G	V	G	G	I	A	G	H	S	G	I	I	Q	L	R	S	N	V	N	L	N	I	E	G	R	I	H	L	S	P	F	F	D	L	K	P	F	Q	V	F	V	G	F	D	N	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T								T	T							S				G	G	G	G	G	G	T							T	T							S						G	G	G	T	T	S									S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	A	S	S	G	N	L	E	N	C	H	I	Y	G	H	G	V	V	D	F	G	G	Y	E	F	G	A	S	S	Q	L	R	N	G	V	A	F	G	R	S	Y	N	C	S	V	T	G	I	T	F	Q	N	G	D	V	T	W	A	I	T	L	G	W	N	G	Y	G	S	N	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G											S	S						T	T				S		T	T										S								S					S				S		S					B	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	V	R	K	C	R	F	I	N	L	V	N	S	S	V	N	A	D	H	S	T	V	Y	V	N	C	P	Y	S	G	V	E	S	C	Y	F	S	M	S	S	S	F	A	R	N	I	A	C	S	V	E	L	H	Q	H	D	T	F	Y	R	G	S	T	V	N	G	Y	C	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S										S	S											S	S	S					S								T	T												S	S	S					S							S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	Y	V	V	M	H	A	A	E	A	A	G	A	G	S	Y	A	Y	N	M	Q	V	E	N	N	I	A	V	I	Y	G	Q	F	V	I	L	G	S	D	V	T	A	T	V	S	G	H	L	N	D	V	I	V	S	G	N	I	V	S	I	G	E	R	A	A	F	S	A	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G		T	T	T		S									S						S	S									B		S	S		B										S							S			T	T	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	A	F	I	D	I	G	P	D	N	S	G	A	S	N	V	Q	D	I	Q	R	V	L	V	T	G	N	S	F	Y	A	P	A	N	I	T	D	S	A	A	I	T	L	R	A	N	L	N	G	C	T	F	I	A	N	N	F	D	C	R	Y	M	V	Y	N	A	P	G	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			S	S	S										S							T	T		S	S								S		B	S						S					S	S							T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	P	V	V	Q	N	L	V	W	D	K	S	N	V	I	G	G	T	H	A	N	Q	R	A	G	Q	N	L	F	D	M	Q	F	A	S	V	V	N	S	T	I	E	V	Q	L	S	C	E	D	L	S	M	F	S	C	I	L	F	P	A	S	C	Q	L	S	Y	S	K	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S					T	T					S	T	T	T	T			B	T								S	S				S								S	S			T	T	B	S							T	T	S				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	D	S	A	W	T	K	S	M	S	N	T	A	V	F	E	G	N	Q	Q	A	G	A	N	V	Y	V	S	Y	P	A	T	V	N	L	T	S	Y	N	T	Q	G	A	V	P	F	F	S	T	D	T	N	Y	A	W	V	T	S	A	Y	S	L	S	I	N	E	N	L	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		T	T		S		S				T	T		G	G	G	S	T	T															S		S								S	S				T	T		S						S					S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Sequence	S	P	P	A	T	Y	T	N	K	A	N	G	Q	L	V	G	V	G	Y	N	E	I	G	G	V	R	S	V	S	V	R	L	M	L	Q	R	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						T	T	S									S	S

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PDB structure

FASTA sequence

Hidden Markov model

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