Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3jurA_

Fold library idPDB HeaderMoleculeTitle
c3jurA_PDB header: hydrolaseChain: A: PDB Molecule: exo-poly-alpha-d-galacturonosidase;PDBTitle: the crystal structure of a hyperthermoactive2 exopolygalacturonase from thermotoga maritima


Added to library: Sat Aug 28 20:28:20 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELAKKIEEEILNHVREPQIPDREVNLLDFGARGDGRTDCSESFKRAIEELSKQGGGRLIVPEGVFLTGPI
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)







S
GGGGT



T

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence HLKSNIELHVKGTIKFIPDPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWP
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)

TTSS


GGGG
S
TTS

SS
SS



BTTBBGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence WKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMW
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP) GG

GGGT

TTS

ST

GGG
B
STT





SS
S
S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYIL
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) SS
S

STT

SB

BS
S
SSB





 .........290.........300.........310.........320.........330.........340.........350
Sequence VRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRRGGYMENIFFIDNVAVNVSEE
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) S

SS
S
SS
TT
S
S
S

TTT
SS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGAKISVLLEFGQL
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) S
GGG


S


S

S
BTTB
S
S
 .........430.........440....
Sequence GMENVIMNGSRFEKLYIEGKALLK
Predicted secondary structure










SS confidence























Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D