Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3cegA_

Fold library idPDB HeaderMoleculeTitle
c3cegA_PDB header: ligaseChain: A: PDB Molecule: baculoviral iap repeat-containing protein 6;PDBTitle: crystal structure of the ubc domain of baculoviral iap2 repeat-containing protein 6


Added to library: Tue Mar 16 14:04:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKSLEEKYVAVXKKLQFDTFEXVSEDEDGKLGFKVNYHYXSQVKNANDANSAARARRLAQEAVTLSTSLP
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)


TTS


TTS
SS

TTT







 .........80.........90.........100.........110.........120.........130.........140
Sequence LSSSSSVFVRCDEERLDIXKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLY
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)

SS

SS
TTB
TTSTTBT


TTTTTS



STTTT


BTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGN
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TT
BB

GGGTSS


GGGS

TTT

TS
SSGGGGSTTGGGGTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IRQATVKWAXLEQIRNPSPCFKEVIHKHFYLKRVEIXAQCEEWIADIQQYGRTXSHHAAALKRHTAQLRE
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) TTS

TTTTT

 .........290..
Sequence ELLKLPCPEGLD
Predicted secondary structure








SS confidence











Known secondary structure (DSSP)



STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D