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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1k5ca_

Fold library idFoldSuperfamilyFamily
d1k5ca_Single-stranded right-handed beta-helixPectin lyase-likeGalacturonase


Added to library: Tue Mar 16 14:07:18 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CTVKSVDDAKDIAGCSAVTLNGFTVPAGNTLVLNPDKGATVTMAGDITFAKTTLDGPLFTIDGTGINFVG
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Known secondary structure (DSSP)

STTGGGG
TT
S


TT




TT

S




S
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGSGTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFA
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Known secondary structure (DSSP) TT


GGGT

S
TTTSSS




SS
S
SS

S

GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDTKNLGHNTDGFDVSANNVTIQNCIVKNQDDCIAINDGNNIRFENNQCSGGHGISIGSIATGKHVSNVV
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Known secondary structure (DSSP) GGGGG


S

S
SSS
SSS
SS
SS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGTGAPFSDVNFTG
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Known secondary structure (DSSP) S
TT

S
S
TSSSSS

SSS

S
 .........290.........300.........310.........320.........330...
Sequence GATTIKVNNAATRVTVECGNCSGNWNWSQLTVTGGKAGTIKSDKAKITGGQYL
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Known secondary structure (DSSP) S

TT

SSSSSB



TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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