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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2020 Feb 15

Fold library idPDB HeaderMoleculeTitle
c6jexA_ 2.11 hydrolase Chain: A: peptide deformylase;
c6vddD_ 1.90 transferase/dna Chain: D: dna polymerase i;
c6pnjF_ 3.20 photosynthesis Chain: F: photosystem i reaction center protein psaf subunit iii;
c6pnjL_ 3.20 photosynthesis Chain: L: photosystem i reaction center protein subunit xi;
c6jf8A_ 1.70 hydrolase Chain: A: peptide deformylase;
c6rwkU_ 3.86 protein transport Chain: U: protein mxig;
c6vdeA_ 2.71 transferase Chain: A: dna polymerase i;
c6ltjQ_ 3.70 gene regulation Chain: Q: swi/snf-related matrix-associated actin-dependent regulator
c6pnjI_ 3.20 photosynthesis Chain: I: photosystem i subunit viii;
c6rwkN_ 3.86 protein transport Chain: N: protein mxig;
c6pb1U_ 2.80 signaling protein Chain: U: urocortin;
c6jwrA_ 2.60 transferase Chain: A: 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase-
c6rwxv_ 3.55 protein transport Chain: V:
c6pdyA_ 3.70 protein transport Chain: A: membrane-spanning atpase-like protein;
c6kffG_ 3.80 transport protein Chain: G: innexin-6;
c6rwkY_ 3.86 protein transport Chain: Y: outer membrane protein mxid;
c6puzB_ 2.80 viral protein/dna Chain: B: chimeric sso7d and hiv-1 integrase;
c6nwvA_ 1.60 hormone Chain: A: insulin a chain;
c6pt0R_ 3.20 membrane protein Chain: R: cannabinoid receptor 2;
c6ed8B_ 1.92 transferase Chain: B: glutathione s-transferase;
c6l2gC_ 2.41 transferase Chain: C: acetyl-coa-acetyltransferase, putative;
c6rwxE_ 3.55 protein transport Chain: E: protein mxig;
c6jf9B_ 1.70 hydrolase Chain: B: peptide deformylase;
c6ecyB_ 1.40 oxidoreductase Chain: B: organic hydroperoxide resistance protein;
c6p3yB_ 2.57 rna binding protein Chain: B: apolipoprotein b mrna editing enzyme, catalytic peptide-
c6qph1_ 3.40 photosynthesis Chain: 1: chlorophyll a-b binding protein, chloroplastic;
c6tbmB_ 20.00 transcription Chain: B: transcriptional regulator involved in glucose repression of
c6pnjW_ 3.20 photosynthesis Chain: W: photosystem one psax;
c6tmfc_ 2.80 ribosome Chain: C: 30s ribosomal protein s3;
c6jfpB_ 2.70 sugar binding protein Chain: B: beta-glucosidase 15;
c6lthP_ 3.00 gene regulation Chain: P: swi/snf-related matrix-associated actin-dependent regulator
c6jbsB_ 2.40 hydrolase Chain: B: beta-d-xylosidase/beta-d-glucosidase;
c6rhtA_ 1.90 oxidoreductase Chain: A: putative l-lactate oxidase;
c6nwzA_ 2.60 hydrolase Chain: A: carbohydrate deacetylase agd3;
c6liuF_ 2.80 lyase Chain: F: tyrosine/dopa decarboxylase 2;
c6shlC_ 3.10 virus Chain: C: vp3;
c6qph3_ 3.40 photosynthesis Chain: 3: chlorophyll a-b binding protein, chloroplastic;
c6pnjj_ 3.20 photosynthesis Chain: J: photosystem i reaction centre subunit ix / psaj;
c6tbmO_ 20.00 transcription Chain: O: saga-associated factor 11;
c6shlA_ 3.10 virus Chain: A: vp1;
c6kclA_ 2.70 transferase Chain: A: 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase-
c6k9yD_ 2.20 oxidoreductase Chain: D: synaptic vesicle membrane protein vat-1 homolog;
c6pnjx_ 3.20 photosynthesis Chain: X: photosystem one psax;
c6qj7B_ 1.69 transferase Chain: B: camp-dependent protein kinase inhibitor alpha;
c6tgsA_ 1.53 signaling protein Chain: A: protein nbr1 homolog;
c6kn9E_ 3.30 cytokine Chain: E: scfv;
c6lthO_ 3.00 gene regulation Chain: O: swi/snf complex subunit smarcc2;
c6ltjN_ 3.70 gene regulation Chain: N: swi/snf complex subunit smarcc2;
c6nvzA_ UNK dna binding protein Chain: A: myb family dna-binding protein shaqkyf family;
c6ltjI_ 3.70 gene regulation Chain: I: transcription activator brg1;
c6pb0R_ 3.00 signaling protein Chain: R: corticotropin-releasing factor receptor 1;
c6km8A_ 3.10 plant protein Chain: A: 7s globulin;
c6tbmQ_ 20.00 transcription Chain: Q: ubiquitin carboxyl-terminal hydrolase;
c6s3kB_ 3.70 transport protein Chain: B: apc family permease;
c6nwvK_ 1.60 hormone Chain: K: insulin a chain;
c6opmA_ 3.10 hydrolase/dna Chain: A: crispr-associated endonuclease cas1;
c6pnjT_ 3.20 photosynthesis Chain: T: photosystem i reaction center subunit psak,photosystem i
c6rumA_ 1.60 protein binding Chain: A: gfp-lama-g97 a gfp enhancer nanobody with cpdhfr insertion;
c6ltjR_ 3.70 gene regulation Chain: R: zinc finger protein ubi-d4;
c6scjA_ 3.60 hormone Chain: A: thyroglobulin;
c6qph4_ 3.40 photosynthesis Chain: 4: lhc4;
c6touG_ 2.59 viral protein Chain: G: glycoprotein,glycoprotein;
c6pnjk_ 3.20 photosynthesis Chain: K: photosystem i reaction center subunit psak,photosystem i
c6shuA_ 1.43 transport protein Chain: A: basic membrane protein d;
c6shlD_ 3.10 virus Chain: D: vp4;
c6ltjL_ 3.70 gene regulation Chain: L: at-rich interactive domain-containing protein 1a;
c6tmfd_ 2.80 ribosome Chain: D: 30s ribosomal protein s3ae;
c6khiV_ 3.00 electron transport Chain: V: tlr0472 protein;
c6nwvI_ 1.60 hormone Chain: I: insulin a chain;
c6lthM_ 3.00 gene regulation Chain: M: swi/snf-related matrix-associated actin-dependent regulator
c6t3zA_ 1.56 viral protein Chain: A: nuclear egress protein 2,nuclear egress protein 1;
c6pnjX_ 3.20 photosynthesis Chain: X: photosystem one psax;
c6ltjM_ 3.70 gene regulation Chain: M: swi/snf-related matrix-associated actin-dependent regulator
c6tbmC_ 20.00 transcription Chain: C: subunit of saga histone acetyltransferase complex;
c6tmfI_ 2.80 ribosome Chain: I: 30s ribosomal protein s7;
c6tbmP_ 20.00 transcription Chain: P: transcription and mrna export factor sus1;
c6nwvG_ 1.60 hormone Chain: G: insulin a chain;
c6t3xC_ 1.48 viral protein Chain: C: nuclear egress protein 2,nuclear egress protein 1;
c6lryB_ 3.00 membrane protein Chain: B: sarafotoxin-b;
c6pnjK_ 3.20 photosynthesis Chain: K: photosystem i reaction center subunit psak,photosystem i
c6qphJ_ 3.40 photosynthesis Chain: J: photosystem i reaction center subunit ix;
c6qph2_ 3.40 photosynthesis Chain: 2: lhc2;
c6tmfW_ 2.80 ribosome Chain: W: rna-binding protein;
c6nwvC_ 1.60 hormone Chain: C: insulin a chain;
c6shlB_ 3.10 virus Chain: B: vp2;
c6nwvE_ 1.60 hormone Chain: E: insulin a chain;
c6ltjJ_ 3.70 gene regulation Chain: J: actin-like protein 6a;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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