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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6shuA_

Fold library idPDB HeaderMoleculeTitle
c6shuA_1.43PDB header: transport proteinChain: A: PDB Molecule: basic membrane protein d;


Added to library: Sat Feb 15 08:36:21 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KSEAKTVSLIVDGAFDDKGFNESSSKAIRKLKADLNINIIEKASTGNSYLGDIANLEDGNSNLIWGIGFR
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Known secondary structure (DSSP)

TT
S
S
SSS


GGGTT
SSGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSDILFQRASENVSVNYAIIEGVYDEIQIPKNLLNISFRSEEVAFLAGYFASKASKTGKIGFVGGVRGKV
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Known secondary structure (DSSP) G
TTS
T


SS



TT

SSSSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LESFMYGYEAGAKYANSNIKVVSQYVGTFGDFGLGRSTASNMYRDGVDIIFAAAGLSGIGVIEAAKELGP
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Known secondary structure (DSSP)
TT

SSSS
TT

ST
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DHYIIGVDQDQSYLAPNNVIVSAVKKVDSLMYSLTKKYLETGVLDGGKTMFLGLKEDGLGLVLNENLKSN
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Known secondary structure (DSSP) T
S

GGG
TTT
SS


S
TTTTS
GGG
 .........290.........300.........310......
Sequence YSEIYNKSLKIGQSIMNGIIKVPYDKVSYDNFVLQM
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Known secondary structure (DSSP) TTSS



ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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