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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6opmA_

Fold library idPDB HeaderMoleculeTitle
c6opmA_3.10PDB header: hydrolase/dnaChain: A: PDB Molecule: crispr-associated endonuclease cas1;


Added to library: Sat Feb 15 08:33:16 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XKLLLLNGHGINXHVDGAKLHIKDGRFSTTEEPQEYVFSPKRIDIDGIIIYGKSGNLTLEAIRWLIKHNV
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Known secondary structure (DSSP)

SB
TT

B
SSSS



TT




SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVSILDWNGKLLTTXLPPESTNLRTKFAQYHAFEDKEARLEIAKKFIEAKFYKSKAVLDFLSQRYPEINF
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Known secondary structure (DSSP)
TTS





S

SGGGG
TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence DILDGLTKLKDVKSTREILGVEGTLAGKYWIEFSKAVPKEYDFSNRIDQFRRAXGSGDXINTXLNYGYSL
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Known secondary structure (DSSP)

T

SGGGS
GGG



S

SSS
S
S

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LEAECLKAINSVGLDTHVGFLHEXAPSKNSLAYDLQEPFRFIVDLAVISLIESGAXESKDFIRTENYNLR
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Known secondary structure (DSSP) T

TT

SS



TTS
GGGTTTT


GGG
TTS
 .........290.........300.........310.........320.........330.........340.
Sequence LKPTGARKIVNEFSNTLNKKVSYQGKESTWSYVIFLKVRELAHYLTSKKEKLDFTKPEYEI
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Known secondary structure (DSSP)
T

SSSTTSSS


SSSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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