PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6t3zA_

Fold library id	PDB Header	Molecule	Title
c6t3zA_	1.56	PDB header: viral protein	Chain: A: PDB Molecule: nuclear egress protein 2,nuclear egress protein 1;

Links to external resources
Added to library: Sat Feb 15 08:35:16 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A S P E E R L L D E L N N V I V S F L C D S G S L E V E R C G A H V F S R G S S Q P L C T V K L R H G Q I Y H L E F V Y K F L A F K L K N C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
S S S T T
S
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N Y P S S P V F V I S N N G L A T T L R C F L H E P S G P C L G L S T D V D L P K N S I I M L G Q D D F I K F K S P L V F P A E L D L L K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S S
S
T T
T T T T T S
G G G
S T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence M V V C R A Y I T E H R T T M Q F L V F Q A A N A Q K A S R V M D M I S D M S Q Q L S G D R S H F S L R D F F R G I S A N F E L G K D F L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T

. . . . . . .

Sequence E M N T P I H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	S	P	E	E	R	L	L	D	E	L	N	N	V	I	V	S	F	L	C	D	S	G	S	L	E	V	E	R	C	G	A	H	V	F	S	R	G	S	S	Q	P	L	C	T	V	K	L	R	H	G	Q	I	Y	H	L	E	F	V	Y	K	F	L	A	F	K	L	K	N	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S		S	S	S											S	S	S	T	T					S							T	T																			T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	Y	P	S	S	P	V	F	V	I	S	N	N	G	L	A	T	T	L	R	C	F	L	H	E	P	S	G	P	C	L	G	L	S	T	D	V	D	L	P	K	N	S	I	I	M	L	G	Q	D	D	F	I	K	F	K	S	P	L	V	F	P	A	E	L	D	L	L	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T													S	S								S	S											S						T	T							T	T							T	T	T	S		G	G	G		S	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	V	V	C	R	A	Y	I	T	E	H	R	T	T	M	Q	F	L	V	F	Q	A	A	N	A	Q	K	A	S	R	V	M	D	M	I	S	D	M	S	Q	Q	L	S	G	D	R	S	H	F	S	L	R	D	F	F	R	G	I	S	A	N	F	E	L	G	K	D	F	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T												S																								T	T
	.	.	.	.	.	.	.
Sequence	E	M	N	T	P	I	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)