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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6k9yD_

Fold library idPDB HeaderMoleculeTitle
c6k9yD_2.20PDB header: oxidoreductaseChain: D: PDB Molecule: synaptic vesicle membrane protein vat-1 homolog;


Added to library: Sat Feb 15 09:28:48 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNFADLMARQGLYDRLPPLPVTPGMEGAGV
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Known secondary structure (DSSP)

SSSSGGG








TT

TT

TT

SSSB


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQ
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Known secondary structure (DSSP)
TT

S

TT

SS

SBSGGG

TT

TTTTTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence PGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGV
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Known secondary structure (DSSP) TT
TTTTSTTSTT


GGGT
S
TTTS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGE
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Known secondary structure (DSSP) SS
TTT


GGGG


TSS



T


GGG
TT
 .........290.........300.........310.........320.........330...
Sequence VELVSGVVARLLALYNQGHIKPHIDSVWPFEKVADAMKQMQEKKNVGKVLLVP
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Known secondary structure (DSSP) T




GGGTT

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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