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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ltjL_

Fold library idPDB HeaderMoleculeTitle
c6ltjL_3.70PDB header: gene regulationChain: L: PDB Molecule: at-rich interactive domain-containing protein 1a;


Added to library: Sat Feb 15 08:34:37 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQ
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Known secondary structure (DSSP)



TTSGGG











STTT





SGGGTTT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGR
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Known secondary structure (DSSP) STT

STTSBSSSTT


TTTS
SS
SS








SSSS

TTSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VQEFDSGLLHWRIGGGDTTEHIQTHFESKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFV
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Known secondary structure (DSSP)
S



SSS
B


TT



SS


B
SS






SS



TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PGNDFEMSKHPGLLLILGKLILLHHKHPERKEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVL
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Known secondary structure (DSSP) TTTT
STT



B



TGGG


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFL
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Known secondary structure (DSSP)

SSSSSS

TTS
TT



TSTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQPTSVDMMRRAARALL
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Known secondary structure (DSSP)
SS
TSTT




S
 .........430.........440.........450.........460......
Sequence ALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
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Known secondary structure (DSSP) TTSSSTTT
TTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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