Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	M	N	P	L	I	I	K	L	G	G	V	L	L	D	S	E	E	A	L	E	R	L	F	S	A	L	V	N	Y	R	E	S	H	Q	R	P	L	V	I	V	H	G	G	G	C	V	V	D	E	L	M	K	G	L	N	L	P	V	K
Secondary structure
SS confidence
Disorder		?	?	?	?											?																																										?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		K	K	N	G	L	R	V	T	P	A	D	Q	I	D	I	I	T	G	A	L	A	G	T	A	N	K	T	L	L	A	W	A	K	K	H	Q	I	A	A	V	G	L	F	L	G	D	G	D	S	V	K	V	T	Q	L	D	E	E	L	G
Secondary structure
SS confidence
Disorder		?	?																																	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		H	V	G	L	A	Q	P	G	S	P	K	L	I	N	S	L	L	E	N	G	Y	L	P	V	V	S	S	I	G	V	T	D	E	G	Q	L	M	N	V	N	A	D	Q	A	A	T	A	L	A	A	T	L	G	A	D	L	I	L	L	S
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		D	V	S	G	I	L	D	G	K	G	Q	R	I	A	E	M	T	A	A	K	A	E	Q	L	I	E	Q	G	I	I	T	D	G	M	I	V	K	V	N	A	A	L	D	A	A	R	T	L	G	R	P	V	D	I	A	S	W	R	H	A
Secondary structure
SS confidence
Disorder																														?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Sequence		E	Q	L	P	A	L	F	N	G	M	P	M	G	T	R	I	L	A
Secondary structure
SS confidence
Disorder													?					?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1gs5 chain A Region: 1 - 258 Aligned: 258 Modelled: 258 Confidence: 100.0% Identity: 100% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: N-acetyl-l-glutamate kinase Phyre2 PDB 2buf chain A domain 1 Region: 3 - 256 Aligned: 253 Modelled: 254 Confidence: 100.0% Identity: 31% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: N-acetyl-l-glutamate kinase Phyre2 PDB 2v5h chain B Region: 2 - 258 Aligned: 256 Modelled: 257 Confidence: 100.0% Identity: 33% PDB header:transcription Chain: B: PDB Molecule:acetylglutamate kinase; PDBTitle: controlling the storage of nitrogen as arginine: the2 complex of pii and acetylglutamate kinase from3 synechococcus elongatus pcc 7942 Phyre2 PDB 2rd5 chain A Region: 3 - 256 Aligned: 253 Modelled: 254 Confidence: 100.0% Identity: 34% PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana Phyre2 PDB 2bty chain A domain 1 Region: 3 - 256 Aligned: 252 Modelled: 254 Confidence: 100.0% Identity: 33% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: N-acetyl-l-glutamate kinase Phyre2 PDB 2ap9 chain A domain 1 Region: 3 - 257 Aligned: 252 Modelled: 255 Confidence: 100.0% Identity: 26% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: N-acetyl-l-glutamate kinase Phyre2 PDB 2r98 chain A Region: 3 - 258 Aligned: 250 Modelled: 256 Confidence: 100.0% Identity: 22% PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae Phyre2 PDB 3l86 chain A Region: 1 - 258 Aligned: 242 Modelled: 258 Confidence: 100.0% Identity: 34% PDB header:transferase Chain: A: PDB Molecule:acetylglutamate kinase; PDBTitle: the crystal structure of smu.665 from streptococcus mutans ua159 Phyre2 PDB 2egx chain A Region: 4 - 256 Aligned: 238 Modelled: 251 Confidence: 100.0% Identity: 26% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative acetylglutamate kinase; PDBTitle: crystal structure of the putative acetylglutamate kinase from thermus2 thermophilus Phyre2 PDB 1e19 chain A Region: 3 - 257 Aligned: 250 Modelled: 255 Confidence: 100.0% Identity: 23% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: Carbamate kinase Phyre2 PDB 1b7b chain A Region: 3 - 256 Aligned: 250 Modelled: 254 Confidence: 100.0% Identity: 21% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: Carbamate kinase Phyre2 PDB 2j5t chain F Region: 3 - 258 Aligned: 235 Modelled: 245 Confidence: 100.0% Identity: 20% PDB header:transferase Chain: F: PDB Molecule:glutamate 5-kinase; PDBTitle: glutamate 5-kinase from escherichia coli complexed with2 glutamate Phyre2 PDB 3kzf chain C Region: 3 - 257 Aligned: 248 Modelled: 255 Confidence: 100.0% Identity: 20% PDB header:transferase Chain: C: PDB Molecule:carbamate kinase; PDBTitle: structure of giardia carbamate kinase Phyre2 PDB 2e9y chain A Region: 3 - 257 Aligned: 250 Modelled: 255 Confidence: 100.0% Identity: 23% PDB header:transferase Chain: A: PDB Molecule:carbamate kinase; PDBTitle: crystal structure of project ape1968 from aeropyrum pernix k1 Phyre2 PDB 2w21 chain A Region: 3 - 258 Aligned: 234 Modelled: 256 Confidence: 100.0% Identity: 20% PDB header:transferase Chain: A: PDB Molecule:glutamate 5-kinase; PDBTitle: crystal structure of the aminoacid kinase domain of the2 glutamate 5 kinase of escherichia coli. Phyre2 PDB 3ll5 chain C Region: 2 - 256 Aligned: 228 Modelled: 231 Confidence: 100.0% Identity: 19% PDB header:transferase Chain: C: PDB Molecule:gamma-glutamyl kinase related protein; PDBTitle: crystal structure of t. acidophilum isopentenyl phosphate kinase2 product complex Phyre2 PDB 3ll9 chain A Region: 3 - 256 Aligned: 233 Modelled: 242 Confidence: 100.0% Identity: 22% PDB header:transferase Chain: A: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: x-ray structures of isopentenyl phosphate kinase Phyre2 PDB 3k4y chain B Region: 1 - 256 Aligned: 231 Modelled: 242 Confidence: 100.0% Identity: 22% PDB header:transferase Chain: B: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: crystal structure of isopentenyl phosphate kinase from m. jannaschii2 in complex with ipp Phyre2 PDB 2bne chain A domain 1 Region: 1 - 257 Aligned: 219 Modelled: 227 Confidence: 100.0% Identity: 17% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: PyrH-like Phyre2 PDB 1ybd chain A domain 1 Region: 2 - 256 Aligned: 217 Modelled: 235 Confidence: 100.0% Identity: 15% Fold: Carbamate kinase-like Superfamily: Carbamate kinase-like Family: PyrH-like Phyre2 1 d1gs5a_ 2 d2bufa1 3 c2v5hB_ 4 c2rd5A_ 5 d2btya1 6 d2ap9a1 7 c2r98A_ 8 c3l86A_ 9 c2egxA_ 10 d1e19a_ 11 d1b7ba_ 12 c2j5tF_ 13 c3kzfC_ 14 c2e9yA_ 15 c2w21A_ 16 c3ll5C_ 17 c3ll9A_ 18 c3k4yB_ 19 d2bnea1 20 d1ybda1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1gs5a_ 100.0 100 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:N-acetyl-l-glutamate kinase 2 d2bufa1 100.0 31 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:N-acetyl-l-glutamate kinase 3 c2v5hB_ 100.0 33 PDB header:transcription Chain: B: PDB Molecule:acetylglutamate kinase; PDBTitle: controlling the storage of nitrogen as arginine: the2 complex of pii and acetylglutamate kinase from3 synechococcus elongatus pcc 7942 4 c2rd5A_ 100.0 34 PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana 5 d2btya1 100.0 33 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:N-acetyl-l-glutamate kinase 6 d2ap9a1 100.0 26 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:N-acetyl-l-glutamate kinase 7 c2r98A_ 100.0 22 PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae 8 c3l86A_ 100.0 34 PDB header:transferase Chain: A: PDB Molecule:acetylglutamate kinase; PDBTitle: the crystal structure of smu.665 from streptococcus mutans ua159 9 c2egxA_ 100.0 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative acetylglutamate kinase; PDBTitle: crystal structure of the putative acetylglutamate kinase from thermus2 thermophilus 10 d1e19a_ 100.0 23 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:Carbamate kinase 11 d1b7ba_ 100.0 21 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:Carbamate kinase 12 c2j5tF_ 100.0 20 PDB header:transferase Chain: F: PDB Molecule:glutamate 5-kinase; PDBTitle: glutamate 5-kinase from escherichia coli complexed with2 glutamate 13 c3kzfC_ 100.0 20 PDB header:transferase Chain: C: PDB Molecule:carbamate kinase; PDBTitle: structure of giardia carbamate kinase 14 c2e9yA_ 100.0 23 PDB header:transferase Chain: A: PDB Molecule:carbamate kinase; PDBTitle: crystal structure of project ape1968 from aeropyrum pernix k1 15 c2w21A_ 100.0 20 PDB header:transferase Chain: A: PDB Molecule:glutamate 5-kinase; PDBTitle: crystal structure of the aminoacid kinase domain of the2 glutamate 5 kinase of escherichia coli. 16 c3ll5C_ 100.0 19 PDB header:transferase Chain: C: PDB Molecule:gamma-glutamyl kinase related protein; PDBTitle: crystal structure of t. acidophilum isopentenyl phosphate kinase2 product complex 17 c3ll9A_ 100.0 22 PDB header:transferase Chain: A: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: x-ray structures of isopentenyl phosphate kinase 18 c3k4yB_ 100.0 22 PDB header:transferase Chain: B: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: crystal structure of isopentenyl phosphate kinase from m. jannaschii2 in complex with ipp 19 d2bnea1 100.0 17 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 20 d1ybda1 100.0 15 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 21 d2akoa1 not modelled 100.0 17 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 22 c3d40A_ not modelled 100.0 23 PDB header:transferase Chain: A: PDB Molecule:foma protein; PDBTitle: crystal structure of fosfomycin resistance kinase foma from2 streptomyces wedmorensis complexed with diphosphate 23 d2a1fa1 not modelled 100.0 16 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 24 d2hmfa1 not modelled 100.0 21 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 25 c3c1nA_ not modelled 100.0 19 PDB header:transferase Chain: A: PDB Molecule:probable aspartokinase; PDBTitle: crystal structure of allosteric inhibition threonine-sensitive2 aspartokinase from methanococcus jannaschii with l-threonine 26 d1z9da1 not modelled 100.0 16 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 27 c3nwyB_ not modelled 100.0 16 PDB header:transferase Chain: B: PDB Molecule:uridylate kinase; PDBTitle: structure and allosteric regulation of the uridine monophosphate2 kinase from mycobacterium tuberculosis 28 c3l76B_ not modelled 100.0 20 PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of aspartate kinase from synechocystis 29 c3ek5A_ not modelled 100.0 16 PDB header:transferase Chain: A: PDB Molecule:uridylate kinase; PDBTitle: unique gtp-binding pocket and allostery of ump kinase from a gram-2 negative phytopathogen bacterium 30 d2j0wa1 not modelled 100.0 19 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 31 c2jjxC_ not modelled 100.0 17 PDB header:transferase Chain: C: PDB Molecule:uridylate kinase; PDBTitle: the crystal structure of ump kinase from bacillus anthracis2 (ba1797) 32 d2cdqa1 not modelled 100.0 16 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 33 c2cdqB_ not modelled 100.0 17 PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of arabidopsis thaliana aspartate kinase2 complexed with lysine and s-adenosylmethionine 34 c2j0wA_ not modelled 100.0 18 PDB header:transferase Chain: A: PDB Molecule:lysine-sensitive aspartokinase 3; PDBTitle: crystal structure of e. coli aspartokinase iii in complex2 with aspartate and adp (r-state) 35 c2va1A_ not modelled 100.0 14 PDB header:transferase Chain: A: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of ump kinase from ureaplasma parvum 36 c2ogxA_ not modelled 100.0 20 PDB header:metal binding protein Chain: A: PDB Molecule:molybdenum storage protein subunit alpha; PDBTitle: the crystal structure of the molybdenum storage protein from2 azotobacter vinelandii loaded with polyoxotungstates (wsto) 37 d2brxa1 not modelled 100.0 20 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 38 c2ogxB_ not modelled 100.0 20 PDB header:metal binding protein Chain: B: PDB Molecule:molybdenum storage protein subunit beta; PDBTitle: the crystal structure of the molybdenum storage protein from2 azotobacter vinelandii loaded with polyoxotungstates (wsto) 39 c2j4kC_ not modelled 100.0 17 PDB header:transferase Chain: C: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of uridylate kinase from sulfolobus2 solfataricus in complex with ump to 2.2 angstrom3 resolution 40 d2ij9a1 not modelled 100.0 20 Fold:Carbamate kinase-like Superfamily:Carbamate kinase-like Family:PyrH-like 41 c3ab4K_ not modelled 100.0 23 PDB header:transferase Chain: K: PDB Molecule:aspartokinase; PDBTitle: crystal structure of feedback inhibition resistant mutant of aspartate2 kinase from corynebacterium glutamicum in complex with lysine and3 threonine 42 c3gygA_ not modelled 70.7 7 PDB header:hydrolase Chain: A: PDB Molecule:ntd biosynthesis operon putative hydrolase ntdb; PDBTitle: crystal structure of yhjk (haloacid dehalogenase-like hydrolase2 protein) from bacillus subtilis 43 c2dlnA_ not modelled 58.3 23 PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution 44 d2zdra2 not modelled 53.2 17 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 45 d1iowa1 not modelled 51.6 23 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:D-Alanine ligase N-terminal domain 46 d1xpja_ not modelled 49.7 19 Fold:HAD-like Superfamily:HAD-like Family:Hypothetical protein VC0232 47 c2q4dB_ not modelled 49.3 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lysine decarboxylase-like protein at5g11950; PDBTitle: ensemble refinement of the crystal structure of a lysine2 decarboxylase-like protein from arabidopsis thaliana gene at5g11950 48 d1ydha_ not modelled 45.3 16 Fold:MCP/YpsA-like Superfamily:MCP/YpsA-like Family:MoCo carrier protein-like 49 d2rbka1 not modelled 44.4 21 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 50 c3kv1A_ not modelled 42.4 19 PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri 51 d1wzca1 not modelled 42.2 7 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 52 c3daoB_ not modelled 40.7 20 PDB header:hydrolase Chain: B: PDB Molecule:putative phosphatse; PDBTitle: crystal structure of a putative phosphatse (eubrec_1417) from2 eubacterium rectale at 1.80 a resolution 53 c1xuzA_ not modelled 40.2 17 PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol 54 d1ovma1 not modelled 39.8 18 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 55 d2obba1 not modelled 39.3 13 Fold:HAD-like Superfamily:HAD-like Family:BT0820-like 56 c3r4cA_ not modelled 35.7 29 PDB header:hydrolase Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like hydrolase; PDBTitle: divergence of structure and function among phosphatases of the2 haloalkanoate (had) enzyme superfamily: analysis of bt1666 from3 bacteroides thetaiotaomicron 57 c3ecsD_ not modelled 35.7 10 PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha 58 c3no4A_ not modelled 35.7 12 PDB header:hydrolase Chain: A: PDB Molecule:creatinine amidohydrolase; PDBTitle: crystal structure of a creatinine amidohydrolase (npun_f1913) from2 nostoc punctiforme pcc 73102 at 2.00 a resolution 59 d1zpda1 not modelled 34.5 14 Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain 60 c3fzqA_ not modelled 34.0 26 PDB header:hydrolase Chain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution 61 c2pvpB_ not modelled 33.9 10 PDB header:ligase Chain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: crystal structure of d-alanine-d-alanine ligase from helicobacter2 pylori 62 d1vlia2 not modelled 31.3 15 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 63 d1rkqa_ not modelled 29.9 19 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 64 c2pr7A_ not modelled 26.3 18 PDB header:hydrolase Chain: A: PDB Molecule:haloacid dehalogenase/epoxide hydrolase family; PDBTitle: crystal structure of uncharacterized protein (np_599989.1) from2 corynebacterium glutamicum atcc 13032 kitasato at 1.44 a resolution 65 c2p9jH_ not modelled 26.1 26 PDB header:structural genomics, unknown function Chain: H: PDB Molecule:hypothetical protein aq2171; PDBTitle: crystal structure of aq2171 from aquifex aeolicus 66 c2qniA_ not modelled 25.7 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu0299; PDBTitle: crystal structure of uncharacterized protein atu0299 67 c2i55C_ not modelled 24.9 26 PDB header:isomerase Chain: C: PDB Molecule:phosphomannomutase; PDBTitle: complex of glucose-1,6-bisphosphate with phosphomannomutase from2 leishmania mexicana 68 c2zqeA_ not modelled 24.9 34 PDB header:dna binding protein Chain: A: PDB Molecule:muts2 protein; PDBTitle: crystal structure of the smr domain of thermus thermophilus muts2 69 c3lubE_ not modelled 24.5 18 PDB header:hydrolase Chain: E: PDB Molecule:putative creatinine amidohydrolase; PDBTitle: crystal structure of putative creatinine amidohydrolase2 (yp_211512.1) from bacteroides fragilis nctc 9343 at 2.11 a3 resolution 70 d1v7za_ not modelled 22.8 16 Fold:Creatininase Superfamily:Creatininase Family:Creatininase 71 d1vb5a_ not modelled 21.5 13 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:IF2B-like 72 d2b30a1 not modelled 21.0 24 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 73 d1nrwa_ not modelled 20.6 18 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 74 c1vliA_ not modelled 19.9 14 PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution 75 d1a9xa3 not modelled 19.6 12 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 76 d1rlma_ not modelled 19.4 12 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 77 d1nf2a_ not modelled 18.5 18 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 78 c3mmzA_ not modelled 18.2 19 PDB header:hydrolase Chain: A: PDB Molecule:putative had family hydrolase; PDBTitle: crystal structure of putative had family hydrolase from streptomyces2 avermitilis ma-4680 79 c3niwA_ not modelled 18.1 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase from2 bacteroides thetaiotaomicron 80 d1xvia_ not modelled 16.7 21 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 81 c1xviA_ not modelled 16.7 21 PDB header:hydrolase Chain: A: PDB Molecule:putative mannosyl-3-phosphoglycerate phosphatase; PDBTitle: crystal structure of yedp, phosphatase-like domain protein2 from escherichia coli k12 82 c2iz6A_ not modelled 16.7 19 PDB header:metal transport Chain: A: PDB Molecule:molybdenum cofactor carrier protein; PDBTitle: structure of the chlamydomonas rheinhardtii moco carrier2 protein 83 c1zjjA_ not modelled 15.1 15 PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3 84 c3pgvB_ not modelled 14.0 18 PDB header:hydrolase Chain: B: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution 85 c2hx1D_ not modelled 13.5 17 PDB header:hydrolase Chain: D: PDB Molecule:predicted sugar phosphatases of the had PDBTitle: crystal structure of possible sugar phosphatase, had2 superfamily (zp_00311070.1) from cytophaga hutchinsonii3 atcc 33406 at 2.10 a resolution 86 c3pkiF_ not modelled 13.4 27 PDB header:hydrolase Chain: F: PDB Molecule:nad-dependent deacetylase sirtuin-6; PDBTitle: human sirt6 crystal structure in complex with adp ribose 87 c3a11D_ not modelled 13.3 13 PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 88 c3k35D_ not modelled 13.0 27 PDB header:hydrolase Chain: D: PDB Molecule:nad-dependent deacetylase sirtuin-6; PDBTitle: crystal structure of human sirt6 89 c3qd7X_ not modelled 13.0 31 PDB header:hydrolase Chain: X: PDB Molecule:uncharacterized protein ydal; PDBTitle: crystal structure of ydal, a stand-alone small muts-related protein2 from escherichia coli 90 c3nxkE_ not modelled 12.6 22 PDB header:hydrolase Chain: E: PDB Molecule:cytoplasmic l-asparaginase; PDBTitle: crystal structure of probable cytoplasmic l-asparaginase from2 campylobacter jejuni 91 c3lklB_ not modelled 12.5 16 PDB header:transport protein Chain: B: PDB Molecule:antisigma-factor antagonist stas; PDBTitle: crystal structure of the c-terminal domain of anti-sigma factor2 antagonist stas from rhodobacter sphaeroides 92 c3dnpA_ not modelled 12.4 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:stress response protein yhax; PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis 93 c2vy9A_ not modelled 12.2 13 PDB header:gene regulation Chain: A: PDB Molecule:anti-sigma-factor antagonist; PDBTitle: molecular architecture of the stressosome, a signal2 integration and transduction hub 94 d1l6ra_ not modelled 12.1 16 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 95 d1ehia1 not modelled 12.0 5 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:D-Alanine ligase N-terminal domain 96 c1wnfA_ not modelled 11.9 34 PDB header:hydrolase Chain: A: PDB Molecule:l-asparaginase; PDBTitle: crystal structure of ph0066 from pyrococcus horikoshii 97 c2qyhD_ not modelled 11.5 20 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hypothetical conserved protein, gk1056; PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426 98 d1nzya_ not modelled 10.8 17 Fold:ClpP/crotonase Superfamily:ClpP/crotonase Family:Crotonase-like 99 d1wpga2 not modelled 10.7 7 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0