PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3d40A_

Fold library id	PDB Header	Molecule	Title
c3d40A_	PDB header: transferase	Chain: A: PDB Molecule: foma protein;	PDBTitle: crystal structure of fosfomycin resistance kinase foma from2 streptomyces wedmorensis complexed with diphosphate

Links to external resources
Added to library: Tue Mar 16 12:08:45 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S G L V P R G S H M T P D F L A I K V G G S L F S R K D E P G S L D D D A V T R F A R N F A R L A E T Y R G R M V L I S G G G A F A F S L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
S
G G G T B
T T S T T
B
T T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G L T E A T F E V K K R W A E K L R G I G V D A F P L Q L A A M C T L R N G I P Q L R S E V L R D V L D H G A L P V L A G D A L F D E H G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T T T
S T T
B T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L W A F S S D R V P E V L L P M V E G R L R V V T L T D V D G I V T D G D T I L P E V D A R S P E Q A Y A A L W G S S E G A M H T K L D A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T T
S
S S S S
T T S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . .

Sequence V T C A R R G A E C F I M R G D P G S D L E F L T A P F S S W P A H V R S T R I T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
G G G G S
G G G S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	G	L	V	P	R	G	S	H	M	T	P	D	F	L	A	I	K	V	G	G	S	L	F	S	R	K	D	E	P	G	S	L	D	D	D	A	V	T	R	F	A	R	N	F	A	R	L	A	E	T	Y	R	G	R	M	V	L	I	S	G	G	G	A	F	A	F	S	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T	S			S								G	G	G	T	B		T	T	S	T	T		B																			T	T	T	S													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	L	T	E	A	T	F	E	V	K	K	R	W	A	E	K	L	R	G	I	G	V	D	A	F	P	L	Q	L	A	A	M	C	T	L	R	N	G	I	P	Q	L	R	S	E	V	L	R	D	V	L	D	H	G	A	L	P	V	L	A	G	D	A	L	F	D	E	H	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T								G	G	G	T					T	T							S								T	T												B	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	W	A	F	S	S	D	R	V	P	E	V	L	L	P	M	V	E	G	R	L	R	V	V	T	L	T	D	V	D	G	I	V	T	D	G	D	T	I	L	P	E	V	D	A	R	S	P	E	Q	A	Y	A	A	L	W	G	S	S	E	G	A	M	H	T	K	L	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G					T	T	T	T			S									S	S	S	S														T	T	S											S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Sequence	V	T	C	A	R	R	G	A	E	C	F	I	M	R	G	D	P	G	S	D	L	E	F	L	T	A	P	F	S	S	W	P	A	H	V	R	S	T	R	I	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T										T	T				G	G	G	G	S		G	G	G	S		T	T