PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2j4kC_

Fold library id	PDB Header	Molecule	Title
c2j4kC_	PDB header: transferase	Chain: C: PDB Molecule: uridylate kinase;	PDBTitle: crystal structure of uridylate kinase from sulfolobus2 solfataricus in complex with ump to 2.2 angstrom3 resolution

Links to external resources
Added to library: Tue Mar 16 13:09:42 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N I I L K I S G K F F D E D N V D N L I V L R Q S I K E L A D N G F R V G I V T G G G S T A R R Y I K L A R E I G I G E A Y L D L L G I W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G T T T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S R L N A Y L V M F S L Q D L A Y M H V P Q S L E E F I Q D W S H G K V V V T G G F Q P G Q S T A A V A A L V A E A S S S K T L V V A T N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T B
S
S S T T S S B
S T T S
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . .

Sequence V D G V Y E K D P R I Y I P H L T T Q D L R L L D P L A I K I V E R S K I R V I V M N Y R K L N R I I D I L K G E E V S S I I E P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T
T T
G G G G G G T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	I	I	L	K	I	S	G	K	F	F	D	E	D	N	V	D	N	L	I	V	L	R	Q	S	I	K	E	L	A	D	N	G	F	R	V	G	I	V	T	G	G	G	S	T	A	R	R	Y	I	K	L	A	R	E	I	G	I	G	E	A	Y	L	D	L	L	G	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	G	T	T	T																		T	T																							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	R	L	N	A	Y	L	V	M	F	S	L	Q	D	L	A	Y	M	H	V	P	Q	S	L	E	E	F	I	Q	D	W	S	H	G	K	V	V	V	T	G	G	F	Q	P	G	Q	S	T	A	A	V	A	A	L	V	A	E	A	S	S	S	K	T	L	V	V	A	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T	T	B		S				S	S									T	T	S	S	B							S	T	T	S													T	T		S							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Sequence	V	D	G	V	Y	E	K	D	P	R	I	Y	I	P	H	L	T	T	Q	D	L	R	L	L	D	P	L	A	I	K	I	V	E	R	S	K	I	R	V	I	V	M	N	Y	R	K	L	N	R	I	I	D	I	L	K	G	E	E	V	S	S	I	I	E	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S	S		T	T																									T	T								G	G	G	G	G	G							T		S	S