PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2qyhD_

Fold library id	PDB Header	Molecule	Title
c2qyhD_	PDB header: structural genomics, unknown function	Chain: D: PDB Molecule: hypothetical conserved protein, gk1056;	PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426

Links to external resources
Added to library: Tue Mar 16 12:29:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X G R K I V F F D I D G T L L D E Q K Q L P L S T I E A V R R L K Q S G V Y V A I A T G R A P F X F E H V R K Q L G I D S F V S F N G Q Y V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B T T T B
T T S
T T
S S
G G G S T
G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V F E G N V L Y K Q P L R R E K V R A L T E E A H K N G H P L V F X D A E K X R A S I G D H P H I H V S X A S L K F A H P P V D P L Y Y E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S S
S S T T
T T T
B
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K D I Y Q A L L F C R A E E E E P Y V R N Y P E F R F V R W H D V S T D V L P A G G S K A E G I R X X I E K L G I D K K D V Y A F G D G L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T T
T T T T T T
T
G G G
S G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . .

Sequence D I E X L S F V G T G V A X G N A H E E V K R V A D F V T K P V D K E G I W Y G L K Q L Q L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S S
T T
S
G G G T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	G	R	K	I	V	F	F	D	I	D	G	T	L	L	D	E	Q	K	Q	L	P	L	S	T	I	E	A	V	R	R	L	K	Q	S	G	V	Y	V	A	I	A	T	G	R	A	P	F	X	F	E	H	V	R	K	Q	L	G	I	D	S	F	V	S	F	N	G	Q	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	B	T	T	T	B		T	T	S																T	T								S	S		G	G	G	S								T							G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	F	E	G	N	V	L	Y	K	Q	P	L	R	R	E	K	V	R	A	L	T	E	E	A	H	K	N	G	H	P	L	V	F	X	D	A	E	K	X	R	A	S	I	G	D	H	P	H	I	H	V	S	X	A	S	L	K	F	A	H	P	P	V	D	P	L	Y	Y	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																							T	T								S	S					S	S	T	T										T	T	T						B		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	D	I	Y	Q	A	L	L	F	C	R	A	E	E	E	E	P	Y	V	R	N	Y	P	E	F	R	F	V	R	W	H	D	V	S	T	D	V	L	P	A	G	G	S	K	A	E	G	I	R	X	X	I	E	K	L	G	I	D	K	K	D	V	Y	A	F	G	D	G	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S								T	T	T									T	T								T	T							T	T															T			G	G	G							S	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Sequence	D	I	E	X	L	S	F	V	G	T	G	V	A	X	G	N	A	H	E	E	V	K	R	V	A	D	F	V	T	K	P	V	D	K	E	G	I	W	Y	G	L	K	Q	L	Q	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G							S	S						T	T										S						G	G	G	T									T	T