PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dnpA_

Fold library id	PDB Header	Molecule	Title
c3dnpA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: stress response protein yhax;	PDBTitle: crystal structure of stress response protein yhax from2 bacillus subtilis

Links to external resources
Added to library: Tue Mar 16 12:07:09 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K Q L L A L N I D G A L L R S N G K I H Q A T K D A I E Y V K K K G I Y V T L V T N R H F R S A Q K I A K S L K L D A K L I T H S G A Y I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S
T T
B
S S
T T
S
G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E K I D A P F F E K R I S D D H T F N I V Q V L E S Y Q C N I R L L H E K Y S I G N K K K V N S N L L G K A L I H P S D P I F Y P V Q F V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S
S
T S S
S S
S
B T T T B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S L S D L L X D E P V S A P V I E V Y T E H D I Q H D I T E T I T K A F P A V D V I R V N D E K L N I V P K G V S K E A G L A L V A S E L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
G G G
T T T T T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . .

Sequence L S X D D V V A I G H Q Y D D L P X I E L A G L G V A X G N A V P E I K R K A D W V T R S N D E Q G V A Y X X K E Y F R X Q Q R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S G G G S S
T T S
S S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	Q	L	L	A	L	N	I	D	G	A	L	L	R	S	N	G	K	I	H	Q	A	T	K	D	A	I	E	Y	V	K	K	K	G	I	Y	V	T	L	V	T	N	R	H	F	R	S	A	Q	K	I	A	K	S	L	K	L	D	A	K	L	I	T	H	S	G	A	Y	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		T	T	S																T	T						B		S	S												T	T			S					G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	K	I	D	A	P	F	F	E	K	R	I	S	D	D	H	T	F	N	I	V	Q	V	L	E	S	Y	Q	C	N	I	R	L	L	H	E	K	Y	S	I	G	N	K	K	K	V	N	S	N	L	L	G	K	A	L	I	H	P	S	D	P	I	F	Y	P	V	Q	F	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	S		S																			T	S	S								S	S																	S						B	T	T	T	B						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	S	D	L	L	X	D	E	P	V	S	A	P	V	I	E	V	Y	T	E	H	D	I	Q	H	D	I	T	E	T	I	T	K	A	F	P	A	V	D	V	I	R	V	N	D	E	K	L	N	I	V	P	K	G	V	S	K	E	A	G	L	A	L	V	A	S	E	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S					S								G	G	G													T	T								T	T							T	T														T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Sequence	L	S	X	D	D	V	V	A	I	G	H	Q	Y	D	D	L	P	X	I	E	L	A	G	L	G	V	A	X	G	N	A	V	P	E	I	K	R	K	A	D	W	V	T	R	S	N	D	E	Q	G	V	A	Y	X	X	K	E	Y	F	R	X	Q	Q	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G							S	G	G	G							S	S						T	T	S								S	S						T	T	T	T