PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2w21A_

Fold library id	PDB Header	Molecule	Title
c2w21A_	PDB header: transferase	Chain: A: PDB Molecule: glutamate 5-kinase;	PDBTitle: crystal structure of the aminoacid kinase domain of the2 glutamate 5 kinase of escherichia coli.

Links to external resources
Added to library: Sat Aug 28 17:01:15 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D S Q T L V V K L G T S V L T G G S R R L N R A H I V E L V R Q C A Q L H A A G H R I V I V T S G A I A A G R E H L G Y P E L P A T I A S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S S
T T
T T S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q L L A A V G Q S R L I Q L W E Q L F S I Y G I H V G Q M L L T R A D M E D R E R F L N A R D T L R A L L D N N V V P V I N E N D A V A T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I K V G D N D N L S A L A A I L A G A D K L L L L T D Q K G L Y T A D P R S N P Q A E L I K D V Y G I D D A L R A I A G G M S T K L Q A A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S S S S
B S S
S T T
S S
B
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . .

Sequence V A C R A G I D T I I A A G S K P G V I G D V M E G I S V G T L F H A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S T T T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	Q	T	L	V	V	K	L	G	T	S	V	L	T	G	G	S	R	R	L	N	R	A	H	I	V	E	L	V	R	Q	C	A	Q	L	H	A	A	G	H	R	I	V	I	V	T	S	G	A	I	A	A	G	R	E	H	L	G	Y	P	E	L	P	A	T	I	A	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	S	S	S																			T	T																		T	T	S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	L	L	A	A	V	G	Q	S	R	L	I	Q	L	W	E	Q	L	F	S	I	Y	G	I	H	V	G	Q	M	L	L	T	R	A	D	M	E	D	R	E	R	F	L	N	A	R	D	T	L	R	A	L	L	D	N	N	V	V	P	V	I	N	E	N	D	A	V	A	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T															S																	T	T									T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	K	V	G	D	N	D	N	L	S	A	L	A	A	I	L	A	G	A	D	K	L	L	L	L	T	D	Q	K	G	L	Y	T	A	D	P	R	S	N	P	Q	A	E	L	I	K	D	V	Y	G	I	D	D	A	L	R	A	I	A	G	G	M	S	T	K	L	Q	A	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S													T	T		S							S	S	S	S		B	S	S		S	T	T		S	S			B														T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Sequence	V	A	C	R	A	G	I	D	T	I	I	A	A	G	S	K	P	G	V	I	G	D	V	M	E	G	I	S	V	G	T	L	F	H	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T								T	T	S	T	T							T	T				S