Fold library entry viewer: c1vliA_

Added to library: Tue Mar 16 14:39:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	F	Q	I	A	N	K	T	V	G	K	D	A	P	V	F	I	I	A	E	A	G	I	N	H	D	G	K	L	D	Q	A	F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T					T	T	S										T	T	T	T	T																T		S							B		G	G	G	G	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	Q	S	X	E	X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	T	V	C	D	E	G	S	A	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	N	R	P	X	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	B	S	S		G	G	G											T	T						B			S									T	T			S						G	G	G	T	T										T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	S	T	A	G	A	E	I	S	D	V	H	E	A	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	P	P	E	Y	S	N	L	S	V	I	P	X	L	A	A	A	F	P	E	A	V	I	G	F	S	D	H	S	E	H	P	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T															T	T	T											S	S	S	S			G	G	G			T	T									S	T	T	S									S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	P	C	A	A	V	R	L	G	A	K	L	I	E	K	H	F	T	I	D	K	N	L	P	G	A	D	H	S	F	A	L	N	P	D	E	L	K	E	X	V	D	G	I	R	K	T	E	A	E	L	K	Q	G	I	T	K	P	V	S	E	K	L	L	G	S	S	Y	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S						B		S		T	T	S	S		S	S		T	T	S	B																						T													S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	T	A	I	E	G	E	I	R	N	F	A	Y	R	G	I	F	T	T	A	P	I	Q	K	G	E	A	F	S	E	D	N	I	A	V	L	R	P	G	Q	K	P	Q	G	L	H	P	R	F	F	E	L	L	T	S	G	V	R	A	V	R	D	I	P	A	D	T	G	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		S					T	S						S	S		B		T	T		B			T	T	T							T	T	S				B		G	G	G						T	T		B		S	S		B		T	T		B
	.	.	.	.	.	.	.	.
Sequence	W	D	D	I	L	L	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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