Email l.a.kelley@imperial.ac.uk Description P08365 Date Thu Jan 5 11:01:12 GMT 2012 Unique Job ID c021fd3c821ea65c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ub4c_ 99.9 32 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 2 d1mvfd_ 99.6 36 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:Kis/PemI addiction antidote 3 c3zvkG_ 98.6 16 PDB header:antitoxin/toxin/dna Chain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb; PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter 4 c3tndF_ 98.2 20 PDB header:translation, toxin Chain: F: PDB Molecule:antitoxin vapb; PDBTitle: crystal structure of shigella flexneri vapbc toxin-antitoxin complex 5 d1yfba1 97.0 23 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 6 d2fy9a1 96.9 21 Fold:Double-split beta-barrel Superfamily:AbrB/MazE/MraZ-like Family:AbrB N-terminal domain-like 7 c2w1tB_ 96.8 24 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: crystal structure of b. subtilis spovt 8 c2l66B_ 96.0 15 PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, abrb family; PDBTitle: the dna-recognition fold of sso7c4 suggests a new member of spovt-abrb2 superfamily from archaea. 9 c2ro5B_ 95.9 28 PDB header:transcription Chain: B: PDB Molecule:stage v sporulation protein t; PDBTitle: rdc-refined solution structure of the n-terminal dna2 recognition domain of the bacillus subtilis transition-3 state regulator spovt 10 c2glwA_ 93.4 21 PDB header:transcription Chain: A: PDB Molecule:92aa long hypothetical protein; PDBTitle: the solution structure of phs018 from pyrococcus horikoshii 11 c3o27B_ 93.1 17 PDB header:dna binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: the crystal structure of c68 from the hybrid virus-plasmid pssvx 12 c2pjhB_ 83.2 24 PDB header:transport protein Chain: B: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: strctural model of the p97 n domain- npl4 ubd complex 13 c1cz5A_ 77.2 23 PDB header:hydrolase Chain: A: PDB Molecule:vcp-like atpase; PDBTitle: nmr structure of vat-n: the n-terminal domain of vat (vcp-2 like atpase of thermoplasma) 14 d2d9ra1 76.0 22 Fold:Double-split beta-barrel Superfamily:AF2212/PG0164-like Family:PG0164-like 15 d1cz5a1 72.6 18 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 16 d1h0ha1 59.5 10 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 17 d2jioa1 59.3 16 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 18 d2iv2x1 58.9 14 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 19 d1zq1a1 56.5 19 Fold:Sm-like fold Superfamily:GatD N-terminal domain-like Family:GatD N-terminal domain-like 20 c1h9mB_ 55.9 29 PDB header:binding protein Chain: B: PDB Molecule:molybdenum-binding-protein; PDBTitle: two crystal structures of the cytoplasmic molybdate-binding2 protein modg suggest a novel cooperative binding mechanism3 and provide insights into ligand-binding specificity.4 peg-grown form with molybdate bound 21 d1vlfm1 not modelled 52.8 19 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 22 d2vbua1 not modelled 52.3 16 Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin kinase-like Family:CTP-dependent riboflavin kinase-like 23 d1g8ka1 not modelled 52.1 16 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 24 d1e32a1 not modelled 51.7 17 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 25 d3d31a1 not modelled 46.4 19 Fold:OB-fold Superfamily:MOP-like Family:ABC-transporter additional domain 26 d1tmoa1 not modelled 45.3 19 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 27 d1eu1a1 not modelled 45.1 10 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 28 d1ogya1 not modelled 44.1 10 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 29 d1kqfa1 not modelled 43.9 9 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 30 c2ki8A_ not modelled 43.5 19 PDB header:oxidoreductase Chain: A: PDB Molecule:tungsten formylmethanofuran dehydrogenase, PDBTitle: solution nmr structure of tungsten formylmethanofuran2 dehydrogenase subunit d from archaeoglobus fulgidus,3 northeast structural genomics consortium target att7 31 d1h9ma1 not modelled 42.7 26 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 32 c2iv2X_ not modelled 42.4 14 PDB header:oxidoreductase Chain: X: PDB Molecule:formate dehydrogenase h; PDBTitle: reinterpretation of reduced form of formate dehydrogenase h2 from e. coli 33 c1wlfA_ not modelled 41.9 23 PDB header:protein transport Chain: A: PDB Molecule:peroxisome biogenesis factor 1; PDBTitle: structure of the n-terminal domain of pex1 aaa-atpase:2 characterization of a putative adaptor-binding domain 34 d1h9ma2 not modelled 38.6 29 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 35 d1dmra1 not modelled 38.4 10 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 36 d1y5ia1 not modelled 37.3 18 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Formate dehydrogenase/DMSO reductase, C-terminal domain 37 d1fr3a_ not modelled 36.6 24 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 38 c2v45A_ not modelled 33.3 16 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: a new catalytic mechanism of periplasmic nitrate reductase2 from desulfovibrio desulfuricans atcc 27774 from3 crystallographic and epr data and based on detailed4 analysis of the sixth ligand 39 c2k5lA_ not modelled 33.1 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:feoa; PDBTitle: solution nmr structure of protein feoa from clostridium2 thermocellum, northeast structural genomics consortium3 target cmr17 40 d1wlfa2 not modelled 28.3 23 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like 41 c1g8jC_ not modelled 27.9 15 PDB header:oxidoreductase Chain: C: PDB Molecule:arsenite oxidase; PDBTitle: crystal structure analysis of arsenite oxidase from2 alcaligenes faecalis 42 d1guta_ not modelled 27.4 23 Fold:OB-fold Superfamily:MOP-like Family:Molybdate/tungstate binding protein MOP 43 d1h9ra1 not modelled 27.0 17 Fold:OB-fold Superfamily:MOP-like Family:BiMOP, duplicated molybdate-binding domain 44 d2d6fa1 not modelled 26.0 8 Fold:Sm-like fold Superfamily:GatD N-terminal domain-like Family:GatD N-terminal domain-like 45 c2nyaF_ not modelled 25.2 19 PDB header:oxidoreductase Chain: F: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli 46 c3cf1C_ not modelled 24.6 24 PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/adp.alfx 47 c1vlfQ_ not modelled 23.6 19 PDB header:oxidoreductase Chain: Q: PDB Molecule:pyrogallol hydroxytransferase large subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici complexed3 with inhibitor 1,2,4,5-tetrahydroxy-benzene 48 c2e7zA_ not modelled 23.6 16 PDB header:lyase Chain: A: PDB Molecule:acetylene hydratase ahy; PDBTitle: acetylene hydratase from pelobacter acetylenicus 49 d1ylea1 not modelled 23.1 18 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:AstA-like 50 c1kqgA_ not modelled 22.8 10 PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase, nitrate-inducible, major subunit; PDBTitle: formate dehydrogenase n from e. coli 51 c1qw1A_ not modelled 22.6 17 PDB header:gene regulation Chain: A: PDB Molecule:diphtheria toxin repressor; PDBTitle: solution structure of the c-terminal domain of dtxr2 residues 110-226 52 c3d31B_ not modelled 22.3 19 PDB header:transport protein Chain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans 53 c2k5hA_ not modelled 21.9 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein; PDBTitle: solution nmr structure of protein encoded by mth693 from2 methanobacterium thermoautotrophicum: northeast structural3 genomics consortium target tt824a 54 c1eu1A_ not modelled 21.7 10 PDB header:oxidoreductase Chain: A: PDB Molecule:dimethyl sulfoxide reductase; PDBTitle: the crystal structure of rhodobacter sphaeroides dimethylsulfoxide2 reductase reveals two distinct molybdenum coordination environments. 55 c2he4A_ not modelled 21.5 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2; PDBTitle: the crystal structure of the second pdz domain of human2 nherf-2 (slc9a3r2) interacting with a mode 1 pdz binding3 motif 56 c1tmoA_ not modelled 20.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:trimethylamine n-oxide reductase; PDBTitle: trimethylamine n-oxide reductase from shewanella massilia 57 c3qglD_ not modelled 20.6 16 PDB header:protein binding Chain: D: PDB Molecule:sorting nexin-27; PDBTitle: crystal structure of pdz domain of sorting nexin 27 (snx27) in complex2 with the eseskv peptide corresponding to the c-terminal tail of girk3 58 c1y5iA_ not modelled 20.5 18 PDB header:oxidoreductase Chain: A: PDB Molecule:respiratory nitrate reductase 1 alpha chain; PDBTitle: the crystal structure of the narghi mutant nari-k86a 59 c1h0hA_ not modelled 20.4 10 PDB header:dehydrogenase Chain: A: PDB Molecule:formate dehydrogenase (large subunit); PDBTitle: tungsten containing formate dehydrogenase from2 desulfovibrio gigas 60 c1s3sA_ not modelled 19.5 19 PDB header:protein binding Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c 61 c1ogyA_ not modelled 18.6 10 PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the heterodimeric nitrate reductase2 from rhodobacter sphaeroides 62 c1h5nC_ not modelled 18.5 10 PDB header:oxidoreductase Chain: C: PDB Molecule:dmso reductase; PDBTitle: dmso reductase modified by the presence of dms and air 63 c3hu2C_ not modelled 18.3 24 PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs 64 c2k4yA_ not modelled 17.2 13 PDB header:metal transport Chain: A: PDB Molecule:feoa-like protein; PDBTitle: nmr structure of feoa-like protein from clostridium2 acetobutylicum: northeast structural genomics consortium3 target car178 65 d1a62a2 not modelled 17.1 11 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 66 c2jilA_ not modelled 16.8 31 PDB header:membrane protein Chain: A: PDB Molecule:glutamate receptor interacting protein-1; PDBTitle: crystal structure of 2nd pdz domain of glutamate receptor2 interacting protein-1 (grip1) 67 c1zeqX_ not modelled 16.4 21 PDB header:metal binding protein Chain: X: PDB Molecule:cation efflux system protein cusf; PDBTitle: 1.5 a structure of apo-cusf residues 6-88 from escherichia2 coli 68 c2dxbR_ not modelled 16.4 29 PDB header:hydrolase Chain: R: PDB Molecule:thiocyanate hydrolase subunit gamma; PDBTitle: recombinant thiocyanate hydrolase comprising partially-modified cobalt2 centers 69 c1uheA_ not modelled 16.2 26 PDB header:lyase Chain: A: PDB Molecule:aspartate 1-decarboxylase alpha chain; PDBTitle: crystal structure of aspartate decarboxylase, isoaspargine complex 70 d2exda1 not modelled 16.2 25 Fold:OB-fold Superfamily:NfeD domain-like Family:NfeD domain-like 71 d2byga1 not modelled 15.4 31 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 72 d1qvpa_ not modelled 14.5 17 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 73 d1qw1a1 not modelled 14.3 18 Fold:SH3-like barrel Superfamily:C-terminal domain of transcriptional repressors Family:FeoA-like 74 d1v29a_ not modelled 13.6 30 Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain 75 c2qt7B_ not modelled 13.6 16 PDB header:hydrolase Chain: B: PDB Molecule:receptor-type tyrosine-protein phosphatase-like PDBTitle: crystallographic structure of the mature ectodomain of the2 human receptor-type protein-tyrosine phosphatase ia-2 at3 1.30 angstroms 76 c2fugC_ not modelled 13.5 10 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus 77 c3idwA_ not modelled 13.5 33 PDB header:endocytosis Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1; PDBTitle: crystal structure of sla1 homology domain 2 78 d2i6va1 not modelled 13.2 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 79 c3pjyB_ not modelled 13.0 22 PDB header:transcription regulator Chain: B: PDB Molecule:hypothetical signal peptide protein; PDBTitle: crystal structure of a putative transcription regulator (r01717) from2 sinorhizobium meliloti 1021 at 1.55 a resolution 80 c3qyhG_ not modelled 12.9 20 PDB header:lyase Chain: G: PDB Molecule:co-type nitrile hydratase alpha subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-h71l from2 pseudomonas putida. 81 d2fe5a1 not modelled 12.9 38 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 82 d2qdya1 not modelled 12.8 20 Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain 83 c3plxB_ not modelled 12.7 13 PDB header:lyase Chain: B: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: the crystal structure of aspartate alpha-decarboxylase from2 campylobacter jejuni subsp. jejuni nctc 11168 84 c2ivfA_ not modelled 12.5 9 PDB header:oxidoreductase Chain: A: PDB Molecule:ethylbenzene dehydrogenase alpha-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum 85 c1vc3B_ not modelled 12.0 16 PDB header:lyase Chain: B: PDB Molecule:l-aspartate-alpha-decarboxylase heavy chain; PDBTitle: crystal structure of l-aspartate-alpha-decarboxylase 86 c2c45F_ not modelled 12.0 23 PDB header:lyase Chain: F: PDB Molecule:aspartate 1-decarboxylase precursor; PDBTitle: native precursor of pyruvoyl dependent aspartate2 decarboxylase 87 d1iz6a2 not modelled 11.9 21 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 88 c2komA_ not modelled 11.5 31 PDB header:signaling protein Chain: A: PDB Molecule:partitioning defective 3 homolog; PDBTitle: solution structure of humar par-3b pdz2 (residues 451-549) 89 d1x5qa1 not modelled 11.3 25 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 90 d2i4sa1 not modelled 11.3 20 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:EpsC C-terminal domain-like 91 d2cqaa1 not modelled 11.3 12 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TIP49 domain 92 c3m7aA_ not modelled 11.2 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of saro_0823 (yp_496102.1) a protein of2 unknown function from novosphingobium aromaticivorans dsm3 12444 at 1.22 a resolution 93 c2jxoA_ not modelled 11.1 19 PDB header:protein binding Chain: A: PDB Molecule:ezrin-radixin-moesin-binding phosphoprotein 50; PDBTitle: structure of the second pdz domain of nherf-1 94 c3ougA_ not modelled 11.1 23 PDB header:lyase Chain: A: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: crystal structure of cleaved l-aspartate-alpha-decarboxylase from2 francisella tularensis 95 d1zoka1 not modelled 11.1 35 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 96 d1dgsa2 not modelled 10.8 16 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:DNA ligase/mRNA capping enzyme postcatalytic domain 97 c1pt1B_ not modelled 10.7 6 PDB header:lyase Chain: B: PDB Molecule:aspartate 1-decarboxylase; PDBTitle: unprocessed pyruvoyl dependent aspartate decarboxylase with histidine2 11 mutated to alanine 98 d1ppya_ not modelled 10.6 6 Fold:Double psi beta-barrel Superfamily:ADC-like Family:Pyruvoyl dependent aspartate decarboxylase, ADC 99 d1yela1 not modelled 10.5 13 Fold:DNA-binding pseudobarrel domain Superfamily:DNA-binding pseudobarrel domain Family:B3 DNA binding domain