Fold library entry viewer: c2v45A_

Added to library: Tue Mar 16 13:02:05 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	N	R	P	E	K	W	V	K	G	V	C	R	Y	C	G	T	G	C	G	V	L	V	G	V	K	D	G	K	A	V	A	I	Q	G	N	P	N	N	H	N	A	G	L	L	C	L	K	G	S	L	L	I	P	V	L	N	S	K	E	R	V	T	Q	P	L	V	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S		S								S	S		T	T										T	T									T	T	S	T	T	T	T								T						T		S		S			S					S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	K	G	G	K	L	E	P	V	S	W	D	E	A	L	D	L	M	A	S	R	F	R	S	S	I	D	M	Y	G	P	N	S	V	A	W	Y	G	S	G	Q	C	L	T	E	E	S	Y	V	A	N	K	I	F	K	G	G	F	G	T	N	N	V	D	G	N	P	R	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T																												G	G	G							T	T	S														T	T	T								G	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	A	S	A	V	G	G	Y	V	T	S	F	G	K	D	E	P	M	G	T	Y	A	D	I	D	Q	A	T	C	F	F	I	I	G	S	N	T	S	E	A	H	P	V	L	F	R	R	I	A	R	R	K	Q	V	E	P	G	V	K	I	I	V	A	D	P	R	R	T	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S	S		S		S	S		G	G	G	G	G	T		S						S							S															T	T								S	B			G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	R	I	A	D	M	H	V	A	F	R	P	G	T	D	L	A	F	M	H	S	M	A	W	V	I	I	N	E	E	L	D	N	P	R	F	W	Q	R	Y	V	N	F	M	D	A	E	G	K	P	S	D	F	E	G	Y	K	A	F	L	E	N	Y	R	P	E	K	V	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		S							T	T																T	T		S														T	T	S		B											G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	C	R	V	P	V	E	Q	I	Y	G	A	A	R	A	F	A	E	S	A	A	T	M	S	L	W	C	M	G	I	N	Q	R	V	Q	G	V	F	A	N	N	L	I	H	N	L	H	L	I	T	G	Q	I	C	R	P	G	A	T	S	F	S	L	T	G	Q	P	N	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S															S	S	S											S	S	T	T																T			S	B	T	T	B								S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	G	V	R	D	G	G	A	L	S	H	L	L	P	A	G	R	A	I	P	N	A	K	H	R	A	E	M	E	K	L	W	G	L	P	E	G	R	I	A	P	E	P	G	Y	H	T	V	A	L	F	E	A	L	G	R	G	D	V	K	C	M	I	I	C	E	T	N	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	T		S	T	T			T	T	T			T	T												T	T			T	T		S		S	S															T	S								S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	T	L	P	N	L	N	K	V	H	K	A	M	S	H	P	E	S	F	I	V	C	I	E	A	F	P	D	A	V	T	L	E	Y	A	D	L	V	L	P	P	A	F	W	C	E	R	D	G	V	Y	G	C	G	E	R	R	Y	S	L	T	E	K	A	V	D	P	P	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S								T	T		T	T								S		T	T		G	G	G	G	S		S					B			G	G	G	S							T	T	S									S			S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	C	R	P	T	V	N	T	L	V	E	F	A	R	R	A	G	V	D	P	Q	L	V	N	F	R	N	A	E	D	V	W	N	E	W	R	M	V	S	K	G	T	T	Y	D	F	W	G	M	T	R	E	R	L	R	K	E	S	G	L	I	W	P	C	P	S	E	D	H	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B													T	T			T	T	T	T			S	S													T	T	S	T	T			T	T									S	S				S				S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	S	L	R	Y	V	R	G	Q	D	P	C	V	P	A	D	H	P	D	R	F	F	F	Y	G	K	P	D	G	R	A	V	I	W	M	R	P	A	K	G	A	A	E	E	P	D	A	E	Y	P	L	Y	L	T	S	M	R	V	I	D	H	W	H	T	A	T	M	T	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T	B	T	T	T	S	T	T	S		T	T		S	S	S	B			T	T	S	T	T	S													S	S				S	S	S										S	S			T	T		T	T	G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	P	E	L	Q	K	A	N	P	I	A	F	V	E	I	N	E	E	D	A	A	R	T	G	I	K	H	G	D	S	V	I	V	E	T	R	R	D	A	M	E	L	P	A	R	V	S	D	V	C	R	P	G	L	I	A	V	P	F	F	D	P	K	K	L	V	N	K	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G	S	S		S	S														T			T	T								S	S											S	S	B		T	T									T	T	S		G	G	G	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Sequence	L	D	A	T	D	P	V	S	R	E	P	E	Y	K	I	C	A	A	R	V	R	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		T	T	T			B		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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