Fold library entry viewer: c2iv2X_

Added to library: Tue Mar 16 14:08:14 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	K	V	V	T	V	C	P	Y	C	A	S	G	C	K	I	N	L	V	V	D	N	G	K	I	V	R	A	E	A	A	Q	G	K	T	N	Q	G	T	L	C	L	K	G	Y	Y	G	W	D	F	I	N	D	T	Q	I	L	T	P	R	L	K	T	P	M	I	R	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	B	T	T										T	T											T	T	T	T	T									T	T	G	G	G	G				S	S	S		B			S						S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	G	G	K	L	E	P	V	S	W	D	E	A	L	N	Y	V	A	E	R	L	S	A	I	K	E	K	Y	G	P	D	A	I	Q	T	T	G	S	S	R	G	T	G	N	E	T	N	Y	V	M	Q	K	F	A	R	A	V	I	G	T	N	N	V	D	C	C	A	R	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																											G	G	G							S	S	T	T															T	T								S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	P	S	V	A	G	L	H	Q	S	V	G	N	G	A	M	S	N	A	I	N	E	I	D	N	T	D	L	V	F	V	F	G	Y	N	P	A	D	S	H	P	I	V	A	N	H	V	I	N	A	K	R	N	G	A	K	I	I	V	C	D	P	R	K	I	E	T	A	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S		S						S			S		S	S		G	G	G	G	G	G		S						S																				T	T								S	S							T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	D	M	H	I	A	L	K	N	G	S	N	I	A	L	L	N	A	M	G	H	V	I	I	E	E	N	L	Y	D	K	A	F	V	A	S	R	T	E	G	F	E	E	Y	R	K	I	V	E	G	Y	T	P	E	S	V	E	D	I	T	G	V	S	A	S	E	I	R	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							T	T																T	T		S																					T			S	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	R	M	Y	A	Q	A	K	S	A	A	I	L	W	G	M	G	V	T	Q	F	Y	Q	G	V	E	T	V	R	S	L	T	S	L	A	M	L	T	G	N	L	G	K	P	H	A	G	V	N	P	V	R	G	Q	N	N	V	Q	G	A	C	D	M	G	A	L	P	D	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S							T	T	G	G	G	S	S	S															T	T		S	S	S	T	T		S						S	B	T	T							T	T		B	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	G	Y	Q	Y	V	K	D	P	A	N	R	E	K	F	A	K	A	W	G	V	E	S	L	P	A	H	T	G	Y	R	I	S	E	L	P	H	R	A	A	H	G	E	V	R	A	A	Y	I	M	G	E	D	P	L	Q	T	D	A	E	L	S	A	V	R	K	A	F	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			T	T												T	T		S					S					G	G	G							T	T	S								S							S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	E	L	V	I	V	Q	D	I	F	M	T	K	T	A	S	A	A	D	V	I	L	P	S	T	S	W	G	E	H	E	G	V	F	T	A	A	D	R	G	F	Q	R	F	F	K	A	V	E	P	K	W	D	L	K	T	D	W	Q	I	I	S	E	I	A	T	R	M	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S							S	B							T		S					B			B	T	T	B							T	T	S									S			S	S	S		B													T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	M	H	Y	N	N	T	Q	E	I	W	D	E	L	R	H	L	C	P	D	F	Y	G	A	T	Y	E	K	M	G	E	L	G	F	I	Q	W	P	C	R	D	T	S	D	A	D	Q	G	T	S	Y	L	F	K	E	K	F	D	T	P	N	G	L	A	Q	F	F	T	C	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S													T	T	T	T	T							T	T	T					S					S	S	T	T			B		S	S	S		S	S			S	S	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	W	V	A	P	I	D	K	L	T	D	E	Y	P	M	V	L	S	T	V	R	E	V	G	H	Y	S	C	R	S	M	T	G	N	C	A	A	L	A	A	L	A	D	E	P	G	Y	A	Q	I	N	T	E	D	A	K	R	L	G	I	E	D	E	A	L	V	W	V	H	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S				S	S	S										T	T			S	S		T	T	G	G	G	S					T	T			S	S														T			T	T								S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Sequence	K	G	K	I	I	T	R	A	Q	V	S	D	R	P	N	K	G	A	I	Y	M	T	Y	Q	W	W	P	E	Y	K	Y	C	A	V	R	V	E	P	I	A	D	Q	R	A	A	E	Q	Y	V	I	D	E	Y	N	K	L	K	T	R	L	R	E	A	A	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											S	S	S		T	T												T	T										S

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PDB structure

FASTA sequence

Hidden Markov model

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