Fold library entry viewer: c1h0hA_

Added to library: Tue Mar 16 14:28:53 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	M	A	L	K	T	V	D	A	K	Q	T	T	S	V	C	C	Y	C	S	V	G	C	G	L	I	V	H	T	D	K	K	T	N	R	A	I	N	V	E	G	D	P	D	H	P	I	N	E	G	S	L	C	A	K	G	A	S	T	W	Q	L	A	E	N	E	R	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	S								S	S	B	T	T										T	T	T										T	T		T	T	T	T	T								T						S		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	N	P	L	Y	R	A	P	G	S	D	Q	W	E	E	K	S	W	D	W	M	L	D	T	I	A	E	R	V	A	K	T	R	E	A	T	F	V	T	K	N	A	K	G	Q	V	V	N	R	C	D	G	I	A	S	V	G	S	A	A	M	D	N	E	E	C	W	I	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						T	T		S	S																														T	T	S								S							T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	W	L	R	S	L	G	L	F	Y	I	E	H	Q	A	R	I	H	S	A	T	V	A	A	L	A	E	S	Y	G	R	G	A	M	T	N	H	W	I	D	L	K	N	S	D	V	I	L	M	M	G	S	N	P	A	E	N	H	P	I	S	F	K	W	V	M	R	A	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	B						G	G	G														S			S		S	S		T	G	G	G	G	G		S						S							S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	G	A	T	L	I	H	V	D	P	R	Y	T	R	T	S	T	K	C	D	L	Y	A	P	L	R	S	G	S	D	I	A	F	L	N	G	M	T	K	Y	I	L	E	K	E	L	Y	F	K	D	Y	V	V	N	Y	T	N	A	S	F	I	V	G	E	G	F	A	F	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	S			T	T	G	G	G		S							T	T																T	T		S									B	G	G	G	B	B	B		T	T					T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	L	F	A	G	Y	N	K	E	T	R	K	Y	D	K	S	K	W	G	F	E	R	D	E	N	G	N	P	K	R	D	E	T	L	K	H	P	R	C	V	F	Q	I	M	K	K	H	Y	E	R	Y	D	L	D	K	I	S	A	I	C	G	T	P	K	E	L	I	L	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T			T	T	T	T				G	G	G	G		B		B		T	T	S		B		B		T	T	S		S	T	T	B										T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	D	A	Y	C	A	T	G	K	P	D	K	A	G	T	I	M	Y	A	M	G	W	T	Q	H	T	V	G	V	Q	N	I	R	A	M	S	I	N	Q	L	L	L	G	N	I	G	V	A	G	G	G	V	N	A	L	R	G	E	A	N	V	Q	G	S	T	D	H	G	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	S	T	T												S	S																		T	T		S	S	S	T	T		S						S	B	T	T							T	T		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	M	H	I	Y	P	G	Y	L	G	T	A	R	A	S	I	P	T	Y	E	E	Y	T	K	K	F	T	P	V	S	K	D	P	Q	S	A	N	W	W	S	N	F	P	K	Y	S	A	S	Y	I	K	S	M	W	P	D	A	D	L	N	E	A	Y	G	Y	L	P	K	G	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T	T	T					B	T	T			S															T	T				G	G	G	G														T	T	S									S			B		T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	K	D	Y	S	W	L	T	L	F	D	D	M	F	Q	G	K	I	K	G	F	F	A	W	G	Q	N	P	A	C	S	G	A	N	S	N	K	T	R	E	A	L	T	K	L	D	W	M	V	N	V	N	I	F	D	N	E	T	G	S	F	W	R	G	P	D	M	D	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S										T	T									S							S	B	S									T	T		S							S	S			T	T	T	T	G	G	G	S	T	T			G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	I	K	T	E	V	F	F	L	P	C	A	V	A	I	E	K	E	G	S	I	S	N	S	G	R	W	M	Q	W	R	Y	V	G	P	E	P	R	K	N	A	I	P	D	G	D	L	I	V	E	L	A	K	R	V	Q	K	L	L	A	K	T	P	G	K	L	A	A	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G										B			G	G	G								T	T									S	S				T	T		B																				S		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	K	L	K	T	D	Y	W	V	N	D	H	G	H	F	D	P	H	K	I	A	K	L	I	N	G	F	A	L	K	D	F	K	V	G	D	V	E	Y	K	A	G	Q	Q	I	A	T	F	G	H	L	Q	A	D	G	S	T	T	S	G	C	W	I	Y	T	G	S	Y	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G	G	B		T	T	S		B												B	B	S	S					T	T					T	T		B		S		G	G	G			T	T	S		B			S	S	G	G	G	T	T	S			T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	G	N	M	A	A	R	R	D	K	T	Q	T	D	M	Q	A	K	I	G	L	Y	P	G	W	T	W	A	W	P	V	N	R	R	I	I	Y	N	R	A	S	V	D	L	N	G	K	P	Y	A	P	E	K	A	V	V	E	W	N	A	A	E	K	K	W	V	G	D	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			G	G	G		B												T			T	T	B	S			T	T	T	T		S	S	T	T	G	G	G	G	B		T	T	S		B	S		G	G	G		S					T	T	T	T					S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	G	P	W	P	P	Q	A	D	K	E	K	G	K	R	A	F	I	M	K	P	E	G	Y	A	Y	L	Y	G	P	G	R	E	D	G	P	L	P	E	Y	Y	E	P	M	E	C	P	V	I	E	H	P	F	S	K	T	L	H	N	P	T	A	L	H	F	A	T	E	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S			T	T		T	T	T				S		T	T	S	S	S	S		B		S	S		T	T	S	T	T		S	S								S	S	S					S	S		S			S		T	T			S	S			S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	A	V	C	D	P	R	Y	P	F	I	C	S	T	Y	R	V	T	E	H	W	Q	T	G	L	M	T	R	N	T	P	W	L	L	E	A	E	P	Q	M	F	C	E	M	S	E	E	L	A	T	L	R	G	I	K	N	G	D	K	V	I	L	E	S	V	R	G	K	L	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S										T	T			T	T	S					T	S							S		S														T			T	T								T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.
Sequence	K	A	I	I	T	K	R	I	K	P	F	A	I	Q	G	Q	Q	V	H	M	V	G	I	P	W	H	Y	G	W	S	F	P	K	N	G	G	D	A	A	N	I	L	T	P	S	V	G	N	P	N	T	G	I	P	E	T	K	A	F	M	V	N	V	T	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T							T	T										S				T	T	S	S	T	T	S				G	G	G	S			B	S	S	S		S	S	B	S	B			S

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PDB structure

FASTA sequence

Hidden Markov model

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