Fold library entry viewer: c1h5nC_

Added to library: Tue Mar 16 13:31:02 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	A	N	G	T	V	M	S	G	S	H	W	G	V	F	T	A	T	V	E	N	G	R	A	T	A	F	T	P	W	E	K	D	P	H	P	S	P	M	L	A	G	V	L	D	S	I	Y	S	P	T	R	I	K	Y	P	M	V	R	R	E	F	L	E	K	G	V	N	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T									T	T									T	T		S	S			T	T										S	T	T	B			S											G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	S	T	R	G	N	G	D	F	V	R	V	S	W	D	Q	A	L	D	L	V	A	A	E	V	K	R	V	E	E	T	Y	G	P	E	G	V	F	G	G	S	Y	G	W	K	S	P	G	R	L	H	N	C	T	T	L	L	R	R	M	L	T	L	A	G	G	Y	V	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T	T	S																												G	G	G													S	S														T	T			B	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	D	Y	S	T	G	A	A	Q	V	I	M	P	H	V	V	G	T	L	E	V	Y	E	Q	Q	T	A	W	P	V	L	A	E	N	T	E	V	M	V	F	W	A	A	D	P	I	K	T	S	Q	I	G	W	V	I	P	E	H	G	A	Y	P	G	L	E	A	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S	S	S	T	T									T	S	S			T	T	S			S										S						S							T	T			S	S	B				T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	G	T	K	V	I	V	I	D	P	V	R	T	K	T	V	E	F	F	G	A	E	H	I	T	P	K	P	Q	T	D	V	A	I	M	L	G	M	A	H	T	L	V	A	E	D	L	Y	D	K	D	F	I	A	N	Y	T	S	G	F	D	K	F	L	P	Y	L	D	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S	B									T								T	T																T	T		S																				T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	D	S	T	P	K	T	A	E	W	A	E	G	I	S	G	V	P	A	E	T	I	K	E	L	A	R	L	F	E	S	K	R	T	M	L	A	A	G	W	S	M	Q	R	M	H	H	G	E	Q	A	H	W	M	L	V	T	L	A	S	M	L	G	Q	I	G	L	P	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S														S															S								S	G	G	G	S	S	T	T	T															T		T	T	S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	F	G	L	S	Y	H	Y	S	G	G	G	T	P	S	T	S	G	P	A	L	A	G	I	T	D	G	G	A	S	V	I	P	V	A	R	V	V	D	M	L	E	N	P	G	A	E	F	D	F	N	G	T	R	S	K	F	P	D	V	K	M	A	Y	W	V	G	G	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T	S	T	T	T	T	S				S														B			G	G	G								T	T						T	T															S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	V	H	H	Q	D	R	N	R	M	V	K	A	W	E	K	L	E	T	F	V	V	H	D	F	Q	W	T	P	T	A	R	H	A	D	I	V	L	P	A	T	T	S	Y	E	R	N	D	I	E	T	I	G	D	Y	S	N	T	G	I	L	A	M	K	K	I	V	E	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S									G	G	G		S							S	B							T		S					B			G	G	G	S								T	T	T											S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	E	A	R	S	D	Y	D	I	F	A	A	V	A	E	R	L	G	K	G	A	E	F	T	E	G	K	D	E	M	G	W	I	K	S	F	Y	D	D	A	A	K	Q	G	K	A	A	G	V	Q	M	P	A	F	D	A	F	W	A	E	G	I	V	E	F	P	V	T	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		B													T	T							T	T																					T	T													S							S	S	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	D	F	V	R	Y	A	S	F	R	E	D	P	L	L	N	P	L	G	T	P	T	G	L	I	E	I	Y	S	K	N	I	E	K	M	G	Y	D	D	C	P	A	H	P	T	W	M	E	P	L	E	R	L	D	G	P	G	A	K	Y	P	L	H	I	A	A	S	H	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G			T	T							T	T	T	S			S	S	T	T	S	S			S	S								T		T	T	S		S	S							S	S		T	T		T	T			S	S									S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	R	L	H	S	Q	L	N	G	T	V	L	R	E	G	Y	A	V	Q	G	H	E	P	C	L	M	H	P	D	D	A	A	A	R	G	I	A	D	G	D	V	V	R	V	H	N	D	R	G	Q	I	L	T	G	V	K	V	T	D	A	V	M	K	G	V	I	Q	I	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B	T	T	B	T	T	T	S	G	G	G	G	G	T		B	T	T	B													T	T			T	T								S	S											T	T	B		T	T						T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
Sequence	G	G	W	Y	D	P	S	D	V	T	E	P	G	T	L	D	K	Y	G	D	V	N	V	L	S	A	D	I	G	T	S	K	L	A	Q	G	N	C	G	Q	T	V	L	A	E	V	E	K	Y	T	G	P	A	V	T	L	T	G	F	V	A	P	K	A	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					B	S		T	T	S	T	T			B	S	S			G	G	G	S	S					S		T	T	T					T	T											S							T	T	S			G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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