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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1y5iA_

Fold library idPDB HeaderMoleculeTitle
c1y5iA_PDB header: oxidoreductaseChain: A: PDB Molecule: respiratory nitrate reductase 1 alpha chain;PDBTitle: the crystal structure of the narghi mutant nari-k86a


Added to library: Tue Mar 16 13:30:50 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTW
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Known secondary structure (DSSP)
GGGTGGGTTTT



GGG

S


SSSS



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIE
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Known secondary structure (DSSP)


S



TTS


TT


TGGGGGTSTTB

S
TT
SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence DADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIG
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Known secondary structure (DSSP)
TTTTSS


T
GGG


GGGST
 .........220.........230.........240.........250.........260.........270.........280
Sequence GTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAV
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Known secondary structure (DSSP)


TTTTT
S
TS
S




TT
SS

SGGGGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYA
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Known secondary structure (DSSP)
SS

TSS


TT
TTTS

BSTTB
SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLL
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Known secondary structure (DSSP)
BGGGBTTGGG

SSGGG
B
BTTS

BTTSGGGTSSS
S

S
SSBBTTT

B

B



T
 .........430.........440.........450.........460.........470.........480.........490
Sequence GSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDV
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Known secondary structure (DSSP) TS
S

TT


TTS





SBTTS
TTB

SS

T
 .........500.........510.........520.........530.........540.........550.........560
Sequence NCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINM
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Known secondary structure (DSSP) TSBSSTTS

TT



TS

TSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLS
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Known secondary structure (DSSP) TT
TTSTT

SS



SSTTTT
S


TTGGGG



SGGGS
 .........640.........650.........660.........670.........680.........690.........700
Sequence PMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPE
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Known secondary structure (DSSP) TTS
GGGS
S
TTSS

SS
BSS
TTSTTS
TSS
BGGG
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence NGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVT
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Known secondary structure (DSSP) SSSSS

S

TTTTT
SSTT
S




S

TTTTT



SSS


SS





S
 .........780.........790.........800.........810.........820.........830.........840
Sequence LDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGH
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Known secondary structure (DSSP) SB

T
SB

TTSS


SSSS

SS

STT
B
TTTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence LGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIG
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Known secondary structure (DSSP)



BTTSGGG


SSS


GGGTSS


BTTTB
GGGTB

TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence NGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGR
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Known secondary structure (DSSP) TT


B

SSTTTTSBB

S
TTTBSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence DHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQW
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Known secondary structure (DSSP)

GGGTGGGTT
B

S




TTSSS


SSS


TT



SSTTSSB




S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence MRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLS
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Known secondary structure (DSSP) TT
SS










STTTTTTT

SS



B
SSSBTTBTTT
TTSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence EADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRI
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Known secondary structure (DSSP) T

TT
TTTTS
TT

B


SSSS

B
TTTSSB
B
GGGS


 .........1200.........1210.........1220.........1230.........1240....
Sequence TPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQES
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Known secondary structure (DSSP)


GGGS

SBTTBSB
TTTSS




TT

S


SSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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