Fold library entry viewer: c1tmoA_

Added to library: Tue Mar 16 12:44:41 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	E	D	E	W	L	T	T	G	S	H	F	G	A	F	K	M	K	R	K	N	G	V	I	A	E	V	K	P	F	D	L	D	K	Y	P	T	D	M	I	N	G	I	R	G	M	V	Y	N	P	S	R	V	R	Y	P	M	V	R	L	D	F	L	L	K	G	H	K	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T									T	T									T	T		S	S			G	G	G	G	T						S		T	T	B			S											G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	H	Q	R	G	D	F	R	F	V	R	V	T	W	D	K	A	L	T	L	F	K	H	S	L	D	E	V	Q	T	Q	Y	G	P	S	G	L	H	A	G	Q	T	G	W	R	A	T	G	Q	L	H	S	S	T	S	H	M	Q	R	A	V	G	M	H	G	N	Y	V	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T	T	S																										T		G	G	G											S		T	T	T												T	T				B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	G	D	Y	S	T	G	A	G	Q	T	I	L	P	Y	V	L	G	S	T	E	V	Y	A	Q	G	T	S	W	P	L	I	L	E	H	S	D	T	I	V	L	W	S	N	D	P	Y	K	N	L	Q	V	G	W	N	A	E	T	H	E	S	F	A	Y	L	A	Q	L	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	T	T									T	S	S			T	T	S													S						S							T	S			S	S	B				T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	V	K	Q	G	K	I	R	V	I	S	I	D	P	V	V	T	K	T	Q	A	Y	L	G	C	E	Q	L	Y	V	N	P	Q	T	D	V	T	L	M	L	A	I	A	H	E	M	I	S	K	K	L	Y	D	D	K	F	I	Q	G	Y	S	L	G	F	E	E	F	V	P	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S	S							S	S									T								T	T																T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	M	G	T	K	D	G	V	A	K	T	P	E	W	A	A	P	I	C	G	V	E	A	H	V	I	R	D	L	A	K	T	L	V	K	G	R	T	Q	F	M	M	G	W	C	I	Q	R	Q	Q	H	G	E	Q	P	Y	W	M	A	A	V	L	A	T	M	I	G	Q	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	S													T																S								S	G	G	G	S	S	T	T	T															T		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	P	G	G	G	I	S	Y	G	H	H	Y	S	S	I	G	V	P	S	S	G	A	A	A	P	G	A	F	P	R	N	L	D	E	N	Q	K	P	L	F	D	S	S	D	F	K	G	A	S	S	T	I	P	V	A	R	W	I	D	A	I	L	E	P	G	K	T	I	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T					S		T	T	S	T	T	T	T	S													S	S			T	T				S	S						T	T	S		S				G	G	G							S	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	G	S	K	V	V	Y	P	D	I	K	M	M	I	F	S	G	N	N	P	W	N	H	H	Q	D	R	N	R	M	K	Q	A	F	H	K	L	E	C	V	V	T	V	D	V	N	W	T	A	T	C	R	F	S	D	I	V	L	P	A	C	T	T	Y	E	R	N	D	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S														S							S	S										T	T		S							S	B							T		S					B			G	G	G	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	Y	G	A	Y	A	N	R	G	I	L	A	M	Q	K	M	V	E	P	L	F	D	S	L	S	D	F	E	I	F	T	R	F	A	A	V	L	G	K	E	K	E	Y	T	R	N	M	G	E	M	E	W	L	E	T	L	Y	N	E	C	K	A	A	N	A	G	K	F	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T											S				T	T		B													T	T							T	T																			T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	D	F	A	T	F	W	K	Q	G	Y	V	H	F	G	D	G	E	V	W	T	R	H	A	D	F	R	N	D	P	E	I	N	P	L	G	T	P	S	G	L	I	E	I	F	S	R	K	I	D	Q	F	G	Y	D	D	C	K	G	H	P	T	W	M	E	K	T	E	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T							T	T	T	S			S	S	S	S	S	S			S	S						T	T			T	T	S		S	S							S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	G	G	P	G	S	D	K	H	P	I	W	L	Q	S	C	H	P	D	K	R	L	H	S	Q	M	C	E	S	R	E	Y	R	E	T	Y	A	V	N	G	R	E	P	V	Y	I	S	P	V	D	A	K	A	R	G	I	K	D	G	D	I	V	R	V	F	N	D	R	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T	T	T	T											S	S	S	B	T	T	B	T	T	T						T	T	T		B	T	T	B													T	T			T	T								S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	L	A	G	A	V	V	S	D	N	F	P	K	G	I	V	R	I	H	E	G	A	W	Y	G	P	V	G	K	D	G	S	T	E	G	G	A	E	V	G	A	L	C	S	Y	G	D	P	N	T	L	T	L	D	I	G	T	S	K	L	A	Q	A	C	S	A	Y	T	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S		T	T						T	T								T	T	S		S	G	G	G	G	S	T	T				S	S			G	G	G	S					B	S		T	T	T			B		T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.
Sequence	V	E	F	E	K	Y	Q	G	K	V	P	K	V	S	S	F	D	G	P	I	E	V	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S							S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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