Fold library entry viewer: c2ivfA_

Added to library: Tue Mar 16 12:35:25 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	D	I	Y	R	K	E	W	K	W	D	K	V	N	W	G	S	H	L	N	I	C	W	P	Q	G	S	C	K	F	Y	V	Y	V	R	N	G	I	V	W	R	E	E	Q	A	A	Q	T	P	A	C	N	V	D	Y	V	D	Y	N	P	L	G	C	Q	K	G	S	A	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S			S									S			S	S												T	T														S	S	T	T	S					S				T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	N	L	Y	G	D	E	R	V	K	Y	P	L	K	R	V	G	K	R	G	E	G	K	W	K	R	V	S	W	D	E	A	A	G	D	I	A	D	S	I	I	D	S	F	E	A	Q	G	S	D	G	F	I	L	D	A	P	H	V	H	A	G	S	I	A	W	G	A	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	T	T	B			S						S	S	T	T	S																											G	G	G	G								S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	M	T	Y	L	M	D	G	V	S	P	D	I	N	V	D	I	G	D	T	Y	M	G	A	F	H	T	F	G	K	M	H	M	G	Y	S	A	D	N	L	L	D	A	E	L	I	F	M	T	C	S	N	W	S	Y	T	Y	P	S	S	Y	H	F	L	S	E	A	R	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		B									T											S					B			G	G	G	G	G	G		S						S								T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	A	E	V	V	V	I	A	P	D	F	N	P	T	T	P	A	A	D	L	H	V	P	V	R	V	G	S	D	A	A	F	W	L	G	L	S	Q	V	M	I	D	E	K	L	F	D	R	Q	F	V	C	E	Q	T	D	L	P	L	L	V	R	M	D	T	G	K	F	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S			T	T	G	G	G		S							T	T																T	T		S									B	S	T	T	S				T	T	T		S	B		B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	E	D	V	D	G	G	E	A	K	Q	F	Y	F	F	D	E	K	A	G	S	V	R	K	A	S	R	G	T	L	K	L	D	F	M	P	A	L	E	G	T	F	S	A	R	L	K	N	G	K	T	I	Q	V	R	T	V	F	E	G	L	R	E	H	L	K	D	Y	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S			T	T							T	T	T	T							S	S					S	S					S								T	T	S																G	G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	K	A	S	A	K	C	G	V	P	V	S	L	I	R	E	L	G	R	K	V	A	K	K	R	T	C	S	Y	I	G	F	S	S	A	K	S	Y	H	G	D	L	M	E	R	S	L	F	L	A	M	A	L	S	G	N	W	G	K	P	G	T	G	A	F	A	W	A	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S								T	T	T	T	T	B	T	T															T	T		S	S	S	T	T			S		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	D	N	M	V	Y	L	G	V	M	S	K	P	T	A	Q	G	G	M	D	E	L	H	Q	M	A	E	G	F	N	K	R	T	L	E	A	D	P	T	S	T	D	E	M	G	N	I	E	F	M	K	V	V	T	S	A	V	G	L	V	P	P	A	M	W	L	Y	Y	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		G	G	G	T	T	T																			T	T																		T	T												S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	Y	D	Q	L	W	N	N	K	A	W	T	D	P	A	L	K	K	S	F	G	A	Y	L	D	E	A	K	E	K	G	W	W	T	N	D	H	I	R	P	A	P	D	K	T	P	Q	V	Y	M	L	L	S	Q	N	P	M	R	R	K	R	S	G	A	K	M	F	P	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T					T		G	G	G	S		T	T	S	S	S												T	T	S	S		T	T	T	S		S		T	T	S									S							S	T	T								T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	F	P	K	L	K	M	I	F	A	L	E	T	R	M	S	S	S	A	M	Y	A	D	I	V	L	P	C	A	W	Y	Y	E	K	H	E	M	T	T	P	C	S	G	N	P	F	F	T	F	V	D	R	S	V	A	P	P	G	E	C	R	E	E	W	D	A	I	A	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G		S							S	B			T	T	G	G	G		S					B			T	T										S	S	S										S			S	T	T		B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	K	K	V	G	E	R	A	A	A	R	G	L	T	E	F	N	D	H	N	G	R	K	R	R	Y	D	E	L	Y	K	K	F	T	M	D	G	H	L	L	T	N	E	D	C	L	K	E	M	V	D	I	N	R	A	V	G	V	F	A	K	D	Y	T	Y	E	K	F	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T							T	T	S					G	G	G						T	T	T	T	T			S															T	T	S	S		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	G	Q	T	R	F	L	S	M	G	T	G	V	S	R	Y	A	H	A	N	E	V	D	V	T	K	P	I	Y	P	M	R	W	H	F	D	D	K	K	V	F	P	T	H	T	R	R	A	Q	F	Y	L	D	H	D	W	Y	L	E	A	G	E	S	L	P	T	H	K	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		T	T	S						T		S				T	T	S				S							S					S	S	T	T	S	S	B													T		S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	P	M	V	G	G	D	H	P	F	K	I	T	G	G	H	P	R	V	S	I	H	S	T	H	L	T	N	S	H	L	S	R	L	H	R	G	Q	P	V	V	H	M	N	S	K	D	A	A	E	L	G	I	K	D	G	D	M	A	K	L	F	N	D	F	A	D	C	E	I	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S		S									S	S	S	S	T	T	T	T	T	T						T	T	S		S	S													T	T			T	T								S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	V	R	T	A	P	N	V	Q	P	K	Q	C	I	V	Y	F	W	D	A	H	Q	Y	K	G	W	K	P	Y	D	I	L	L	I	G	M	P	K	P	L	H	L	A	G	G	Y	E	Q	F	R	Y	Y	F	M	N	G	S	P	A	P	V	T	D	R	G	V	R	V	S	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		T	T									G	G	G	S	G	G	G			G	G	G	G							G	G	G	G			S	B	T	T	B			B	T	T	B		S			S				B	T
	.	.
Sequence	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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